Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0645 |
Symbol | |
ID | 7383019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 668714 |
End bp | 670102 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643653956 |
Product | general secretory pathway protein E |
Protein accession | YP_002552125 |
Protein GI | 222109861 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.181851 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCCACC CCCTGCCCTA CGCATTTGCG CGCAGCAGCC AGCTGCTGCT GGAAGACGAC GGCCAGCAGC TCGTGCTGTG GCACGGCCCG CAGCCGGACG CCGGCGCGCT GTCCGAAGTG CTGCGCAAGC ATGCCGTGCA CCAGTTCATG CCGCTGGACG CACCCACGCT GGCGCAGCGC ATCAGCGCGG CGTATTCGCA AAGCGAATCC AGCGCGGCCA CGGTGGTGAG CGAGGTGGAA GAAGGCGCCG ACCTCTCGCG CATGATGCAG GAGCTGCCCG CGGTGGAAGA CCTGCTGGAG TCCGCGGGCG ACGCGCCCAT CATCCGCATG CTCAACGCCC TGCTCACGCA GGCCGTGCGC GACGGCGCGA GCGACATCCA CATCGAGCCC TACGAACGCC ATTCCAGCGT GCGCTTTCGC GTGGACGGCA CGCTGCGCGA GGTGGTGCAG CCCAACCGCG CGCTGCACGC CGCGCTGATC AGCCGCCTGA AGATCATGGC GGACCTGGAC ATCTCCGAAA AGCGCCTGCC GCAGGACGGA CGCATCAGCC TGCGCCTGGG CACCCGCGCC GTCGACGTGC GCGTATCCAC GCTGCCCAAC GCCCATGGCG AGCGCGCCGT GCTGCGCCTC TTGGACAAGA GCGAGAGCAA GCTGAACCTG GAGGCCGTGG GCATGCAGGG CGAGGTGCTG GCGCGGCTCG CGCACCTGAT CCAGCAGCCG CACGGCATCA TCCTCGTGAC CGGCCCCACG GGCTCGGGCA AGACCACCAC GCTGTACGCG GCGCTGGCGC GGCTGGACGC CGCGCGCAGC AACATCATGA CGGTGGAAGA CCCCATCGAG TACGAGTTGC CCGGTGTGGG CCAGACGCAG GTCAATGCCA AGATCGACCT GACGTTTGCC AAGGCCCTGC GCGCCATCCT GCGCCAGGAC CCCGATGTGA TCATGATCGG CGAGATCCGC GACTTCGAGA CCGCGCAGAT CGCCATCCAG GCCTCGCTCA CCGGCCACCT GGTGCTGGCC ACGCTGCACA CCAACGACGC GGCCAGCGCC ATCACGCGCC TGACCGACAT GGGAGTGGAG CCGTTCCTGC TGTCCTCGTC GCTGCTGGGG GTGCTGGCGC AGCGCCTGGT GCGCAAATAT TGCGGCGAGT GCCACGGTGC AGGCTGCGAG CACTGCGGCC ATACCGGCTA CGCGGGGCGC ACCGGCGTGT TCGAACTGCT GGTGGTGGAC GACGCCATCC GCGCACAGAT CCACAACCAG GCCCCGGAGG CCGAGGTGCG CACCCAGGCC CTGGCCGGCG GCATGACGCT GATGCGCGAC GATGGCGAGC GGCTGATCCA CGCCGGCATC ACCAGCCGCG AAGAAGTGCT GCGTGTGACG CGCGACTGA
|
Protein sequence | MRHPLPYAFA RSSQLLLEDD GQQLVLWHGP QPDAGALSEV LRKHAVHQFM PLDAPTLAQR ISAAYSQSES SAATVVSEVE EGADLSRMMQ ELPAVEDLLE SAGDAPIIRM LNALLTQAVR DGASDIHIEP YERHSSVRFR VDGTLREVVQ PNRALHAALI SRLKIMADLD ISEKRLPQDG RISLRLGTRA VDVRVSTLPN AHGERAVLRL LDKSESKLNL EAVGMQGEVL ARLAHLIQQP HGIILVTGPT GSGKTTTLYA ALARLDAARS NIMTVEDPIE YELPGVGQTQ VNAKIDLTFA KALRAILRQD PDVIMIGEIR DFETAQIAIQ ASLTGHLVLA TLHTNDAASA ITRLTDMGVE PFLLSSSLLG VLAQRLVRKY CGECHGAGCE HCGHTGYAGR TGVFELLVVD DAIRAQIHNQ APEAEVRTQA LAGGMTLMRD DGERLIHAGI TSREEVLRVT RD
|
| |