| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0642 |
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| Symbol | |
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| ID | 7383016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 665540 |
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| End bp | 666769 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643653953 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_002552122 |
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| Protein GI | 222109858 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.662272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCCT ATTCCTTCGA AGCCCTGGAC GCCCAAGGCC ATGTGCGCCG CGGCACCCTG
GAGGCCGACA GCCCCAAGGC CGCCCGCAGC CTGCTGCGCG CCCAGGCCCT GGTGCCCCTG
GATGTGGAAG CGCTGGCCGC TGGCACCGCC CCCGGAACAC CCCCCACGCT GGCGCAGCGG
CTGTTCACGC GGCCGGTGTT CAACGCCACG GGGCTGGGCG TGTGGACGCG GCAGCTCGCC
GGGCTGGTGG GCTCGGGCCT GCCGCTGGAG CGTGCGCTGA CCGCGCTCGC CGAAGAGGCG
GACGACGAGC GCCAGCGCCA CCTGCTGGCC GCGCTGCGCG CCGAGGTCAA CGCCGGCTCC
ACCTTCGCAC GCGCGCTGGC GCAGCACCCG CGCGAGTTCT CCGACATCTA CTGCGCCGTG
ATCGGCGCGG GCGAGTCCAG CGGCGGCCTG GCCGAAGTGC TGGACAGCCT GGCGGACGAT
CTGGAGCAGC GCCAGGCCTT GCGCGCCAAG CTCATCGGCG CTGCGCTGTA CCCGGCCATC
GTCACCGTGA TCGCGATCGT CATCGTGCTG TTCCTGGTGG GCTACGTGGT ACCGCAGGTG
GCCAGCGTAT TCGCGGGCAC CAAGCGCGCC CTGCCCTTCC TCACGGTGGC CATGCTGGCC
TTGAGCGACG TGGTGCGCAA CTACGGCTGG GCGTTGCTGG GCGGGCTGGT CCTGCTGGCG
TTCGGCGCCC GCGCCGCGCT GGCCCAGCCG CGGCTGCGCG AGAAGTTCGA CGCCGCCTGG
TTGCGCCTGC CGCTCGTCGG CAAGCTGGCG CGCGGCTACA ACGCGGCGCG TTTCGCCGGC
ACATTGGCCA TGCTGGCAGG CGCGGGCGTG CCCATTCTCA AGGCGCTGCA GGCCGCGGCC
GAGACGCTGA ACAACCGCGC CCTGCGCGCG GACGCACTCG ACGCGCTGGT GCTGGTGCGC
GAGGGCGCGC CGCTGGCCTC GGCACTGGCG CAGAAAAAGC GGTTCCCCGG CCTGGTGGCC
ATGTTCGCGC GGCTGGGCGA ACAGACGGGC CAGTTGCCCA CCATGCTGCA GCGCGCCGCC
ACGCAATTGG GCACCGAGGT GCAGCGCCGC GCCATGCAAC TGGCCACGGT GCTGGAGCCG
CTGCTCATCG TGGCCATGGG CGGCATCGTG ATGTTGATCG TGCTGGCGGT GCTCATGCCG
ATCATCCAGC TCAACCAGTT CGTCAAATGA
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| Protein sequence | MPAYSFEALD AQGHVRRGTL EADSPKAARS LLRAQALVPL DVEALAAGTA PGTPPTLAQR
LFTRPVFNAT GLGVWTRQLA GLVGSGLPLE RALTALAEEA DDERQRHLLA ALRAEVNAGS
TFARALAQHP REFSDIYCAV IGAGESSGGL AEVLDSLADD LEQRQALRAK LIGAALYPAI
VTVIAIVIVL FLVGYVVPQV ASVFAGTKRA LPFLTVAMLA LSDVVRNYGW ALLGGLVLLA
FGARAALAQP RLREKFDAAW LRLPLVGKLA RGYNAARFAG TLAMLAGAGV PILKALQAAA
ETLNNRALRA DALDALVLVR EGAPLASALA QKKRFPGLVA MFARLGEQTG QLPTMLQRAA
TQLGTEVQRR AMQLATVLEP LLIVAMGGIV MLIVLAVLMP IIQLNQFVK
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