Gene Dtpsy_0626 details

Gene Information

• Locus tag: Dtpsy_0626
• ID: 7383000
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 645153
• End bp: 648566
• Gene Length: 3414 bp
• Protein Length: 1137 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643653937
• Product: histidine kinase
• Protein accession: YP_002552106
• Protein GI: 222109842
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGTCC GCCTGTTGGT GGGATTTGCT TTGGCGGCAT TTGCCGCCCT GTTGATCGCC 
GTGCTCACCT ACCGGTCCAA CGACGAGCGC GCGAAAGCCG TGGACAATCT CAACGCGACG 
GTCGAACGGA TCACGCAGAT CCAGATGGTC TGGTCGCATT TGAAGGACGC TGAATCCGCC 
AAGCGGGGCT ACCTGCTGTC GGGGCAGGAG CAGACGCTGG GCTTGTTCAC CGTAGCCCAG 
GCGGCCGTGC CGGTGGCCCT GGAAAAGCTG CGCGGTATGA CGCGCGGGAG TCTCTTGGAG 
CAGCAGCGCT TCGACCAATT GCAGGGGTTG GCCACCAAGC GCATGACCGA ACTTGCGCAC 
ATCGTTGCGC TACAGCGCGA GGGCCGGCGC GAGGAGGCCC TGGAGGCCAT GCGCGGCGAC 
GGTCAGGCCA CCATGGAAAC CACCCGCACG CTGGTGCGCG AGATGCTCAA CACCGAACAG 
CAGCAACTGC AGGCCCAGCG GGAGGTGTGG GAAGGAGCGT TTGGCATCTC GGCCTACCTG 
ACATGGGGCA GTGCCGCCGT GCTGTTGCTG CTGACCTGTG CGTCCGCGGT GATGACCATG 
GCGGAGTACC GCAGCCGCGA GGTCGAGAAC TGGATCAAAG GCAACCTCGT AAGGCTGGGC 
ACGCGGCTGC AAGGTGAGCA GCGCATCCAT GACATGGCGG GTGCTGTCAT CGGCTATCTG 
GCGACGGAGT TGGATGCCAG GGTGGGGGCC ATCTACGTGA CGCAAGGCCA CGGCGTCTTC 
GAGCGCATGG GCGGCTATGC GCTGGCGCCC GACACCGGCC CTGCGGCCGT GCGGGCGGGA 
GAGGGCCTGC TGGGCCAGGC GCTGCAGAGC CGCACTCTTC AGCATGTGCG CCACGTGCCC 
AGCGGGTATC TGCCAGTGAC CTCCGGCACG GGCCAGGCCA CGCCCGCCGA ATTGGTGATG 
ATGCCCATCG TGCTCAATGG CGTAGCGCTC GCGGTGGTCG AGATGGGGTG GTTCCGCACG 
GTCGCTCCGC ACGAGGTTGA CTTCCTTGTG CGCGCCGGGG AGCAGCTGGC CCAGGCTGTT 
CGGGGCGCAT TGGATCGCTC GCGCCTGGAG AGTCTGCTGG ACGAGACGCA GCGCCAGGCG 
GAGGAGTTGC AGGCGCAGCA GGAAGAGCTG CGCGTCAACA ACGAGGAACT GGAGCAGCAA 
AGCCGCATGC TGCAGGAGTC CCAAAACCTG ATGCAGGCGC AGCAGGCGGA GTTGGAGCAC 
AGCAACGCCC AGCTGGAAGC GCAGACCGAG CAGCTGCAGT ACCAAAAGCA GCGCCTGCTG 
ACTGCACAGG ACGCCCTGGA GGCCAAGGCG CGCGATTTGG CGCAGGCCAG TCAGTACAAG 
AGTGAGTTTC TGGCCAACAT GAGCCATGAA TTGCGTACAC CGCTGAATTC CAGCCTGATC 
CTGGCCAAGC TGCTGGCCGA CAACAAGCAG CAGAACCTGA CGGCGGAACA GGTCCGCTAT 
GCGCAGACCA TCCACAACGC TGGCACCGAT CTGCTGAACC TCATCAACGA CATCCTCGAT 
CTGTCAAAGA TCGAGGCGGG GCAGACCTCG GTCGAAATTG GCCAGGTGAC GGTGGCCAAG 
GTGGTGGCGG GCGTGATGGA GCCGCTGCGG GCCCAGGCGC AGGACAAAGG CCTGCAATTC 
AACGCGGTGG TGGAGCCGGG CGTGCCGGCA TTCATAACCT CCGACGCGCA GCGCCTGGCG 
CAGATTCTCA AAAACCTGCT TTCCAATGCG CTCAAGTTCA CCGCGCGCGG CGAAGTGACC 
CTGCGCGTCT TCGCAGGAGA CAACGACACG CTGTGCTTTG CTGTGCGGGA TACGGGCATC 
GGCATCGCGC CCGACCAGCA AGAGCGCATC TTCGATGCCT TCCACCAGGC CGATGGCAGT 
ACCCATCGCA AATACGGCGG CACGGGCTTG GGCCTGTCGA TCTCCCGGGA TCTGGCGCAG 
TTGCTCGGCG GCAGCATCGC GGTGCAGAGT GCGCCGGGCG AAGGCAGCGT CTTCACGCTG 
ACCCTGCCCG TCACGGCGCC CCTTCTCAGC GATGCAGGCG AGCGCCAGGC AAAGATGCCA 
GTGGCGCCGA CGCCTGCCGG ACGCGCTGCC GAACCACCGC ATGCGAGCCA GCCAGAGGCC 
CCGGCGGCAA AACCATGCGC CCCCGTGCAC GTCGTTCCGG ATGACCGGGA GCAGTTGGAA 
CAGGGGCGTT ACACCATCCT GGTCATCGAG GACGACCCGC GGTTTGCGCG CATCCTTTGC 
GACCTCGCGC ATGAGATGGG TTTTCAGTGC GTCATTGCCT CGACGGGCAG CGACGGCCTG 
GCGGCGGCGC TGGAATACGG CCCCAGCGCG GTGGTGCTGG ATATGAACCT GCCGGATTTC 
TCCGGCCTGG GCGTGTTGGA CCAGCTCAAG CGCAACCCGG CCACGCGCCA TATTCCCGTG 
CACGTGGTCT CCGTGGCCGA CTACATGCAG GAGGCCATGG AGCGCGGCGC CATCGGCTAT 
GCGCTCAAGC CCGTCAAGCG CGAGGAACTG GAGCAGGCGC TGCTCCACAT GCAGGCCAAA 
TTCACCCAGA GCATGCGCCG CGTGCTGGTG GTGGAGGACG ACGCGCGCCA GCGCGAGAGC 
GTGCACCATC TGCTGGCAAC CGACGGCGTG GAGATCGTGG GCGCCGCCAC CGCGCGGCAG 
GCATTGGACC TGCTCAAGGG CAGCACGTTC GACTGCGTGG TGATGGACCT GCACCTGCCC 
GACCTGAACG GGTACGAGCT GCTGCAGCAG ATGGCCGAGC AGGAAGAGGT GTCCTTTCCG 
CCCGTCATCG TCTATACCGG GCGCAACTTG TCGCGCGACG AGGAACAGCA ACTGCGACGC 
TTCTCCAAGT CCATCATCAT CAAGGACGCG CGCTCGCCCG AGCGCCTGCT GGACGAGGTC 
ACGCTGTTCC TGCACCAGGT GGAATCCACC TTGCCGGACG ACCGGCGCCG CATGCTGCAG 
CTGGCGCGCG ACCGTGAGTC CACTTTCGAA GGGCGCACCA TTTTGGTGGT GGAGGACGAC 
GTGCGCAACG TGTTCGCGCT GTCCAGCGTG CTGGAGCCCA CGGGGGCGCG CGTGGAGATC 
GCGCGCAACG GACGCGAGGC GCTGGAGGCG CTGGAGCGTT CCAACGCCGC CGGCGAGAGC 
GCCGTGGACC TGGTGCTGAT GGACATCATG ATGCCCGAGA TGGACGGCTT CGCCGCCATG 
GCGGAAATCC GCCGGCGCCC CGAGTGGCGT CGTCTGCCGA TCATCGCGCT GACCGCCAAG 
GCCATGAAGG ACGACCAGGA AAAATGCCTG GCCGCCGGCG CCAACGATTA CATCGCCAAG 
CCGCTGGACG TGGAGAAACT CCTGTCGCTG GTGAGGGTGT GGATGCCCAA GTGA 

 

Protein sequence

MPVRLLVGFA LAAFAALLIA VLTYRSNDER AKAVDNLNAT VERITQIQMV WSHLKDAESA 
KRGYLLSGQE QTLGLFTVAQ AAVPVALEKL RGMTRGSLLE QQRFDQLQGL ATKRMTELAH 
IVALQREGRR EEALEAMRGD GQATMETTRT LVREMLNTEQ QQLQAQREVW EGAFGISAYL 
TWGSAAVLLL LTCASAVMTM AEYRSREVEN WIKGNLVRLG TRLQGEQRIH DMAGAVIGYL 
ATELDARVGA IYVTQGHGVF ERMGGYALAP DTGPAAVRAG EGLLGQALQS RTLQHVRHVP 
SGYLPVTSGT GQATPAELVM MPIVLNGVAL AVVEMGWFRT VAPHEVDFLV RAGEQLAQAV 
RGALDRSRLE SLLDETQRQA EELQAQQEEL RVNNEELEQQ SRMLQESQNL MQAQQAELEH 
SNAQLEAQTE QLQYQKQRLL TAQDALEAKA RDLAQASQYK SEFLANMSHE LRTPLNSSLI 
LAKLLADNKQ QNLTAEQVRY AQTIHNAGTD LLNLINDILD LSKIEAGQTS VEIGQVTVAK 
VVAGVMEPLR AQAQDKGLQF NAVVEPGVPA FITSDAQRLA QILKNLLSNA LKFTARGEVT 
LRVFAGDNDT LCFAVRDTGI GIAPDQQERI FDAFHQADGS THRKYGGTGL GLSISRDLAQ 
LLGGSIAVQS APGEGSVFTL TLPVTAPLLS DAGERQAKMP VAPTPAGRAA EPPHASQPEA 
PAAKPCAPVH VVPDDREQLE QGRYTILVIE DDPRFARILC DLAHEMGFQC VIASTGSDGL 
AAALEYGPSA VVLDMNLPDF SGLGVLDQLK RNPATRHIPV HVVSVADYMQ EAMERGAIGY 
ALKPVKREEL EQALLHMQAK FTQSMRRVLV VEDDARQRES VHHLLATDGV EIVGAATARQ 
ALDLLKGSTF DCVVMDLHLP DLNGYELLQQ MAEQEEVSFP PVIVYTGRNL SRDEEQQLRR 
FSKSIIIKDA RSPERLLDEV TLFLHQVEST LPDDRRRMLQ LARDRESTFE GRTILVVEDD 
VRNVFALSSV LEPTGARVEI ARNGREALEA LERSNAAGES AVDLVLMDIM MPEMDGFAAM 
AEIRRRPEWR RLPIIALTAK AMKDDQEKCL AAGANDYIAK PLDVEKLLSL VRVWMPK