| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0596 |
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| Symbol | prfC |
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| ID | 7382970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 615172 |
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| End bp | 616797 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643653907 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_002552076 |
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| Protein GI | 222109812 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGTACG CCCCAGAAAC CCGGCGCCGC CGGACTTTTG CCATCATCTC CCACCCCGAC
GCCGGCAAGA CCACGCTGAC GGAAAAGCTG CTGCTGTTCT CCGGCGCCAT CCAGATCGCC
GGCGCCGTGA AGGGCCGCAA GGCCAGCCGC CACGCCACCT CCGACTGGAT GGAAATCGAG
AAGCAGCGCG GCATCTCGGT GGCGTCGAGC GTGATGCAGA TGAGCTACCG CGACCATGTC
ATCAACCTGC TGGACACACC GGGCCACAAG GACTTCTCGG AAGACACCTA CCGTGTGCTC
ACCGCAGTGG ACTCGGCCCT GATGGTGATC GACGCGGCCA ACGGCGTGGA GGCGCAGACG
CGCCGCCTGA TCGAGGTCTG CCGCCAGCGC GACACGCCCA TCATCACCTT CGTCAACAAG
ATGGACCGCG AGGTGCGCGA CCCGCTCGAC ATCCTCGACG AGGTCGAGCG CGAGCTGGGC
ATGCCCTGCT GCCCCATCAC CTGGCCCGTG GGCCAGGGCA AGAGCTTCGG CGGCATCATC
AACCTGCGCA CGCAAAGCAT GACGGTCTTC CAGCCCGGCA GCGAAAAGCG CCCGCAGGAC
TTCGAGGTCA TTCCGCTGGC CGATGCCGAC AAGCTGCGCG CGCGCTTCGG TCAGGCCTTT
GACGACGCAC TGGAAAGCAT GGAGCTGGCG CAAGGTGCCT CGGCGCCCTG GGACCATGAA
GCCTTCCTGG CTGGCAAGCT CACACCGGTG TTCTTCGGCT CGGGCGTGAA CAACTTCGGT
GTGATGGAAG TGCTGGATGC GGTGGTGGAC ATGTCGCCCC CGCCCGGCCC GCGCAAGAGC
TCGCTCGTCG TCAACAAGCA GACCGTCGAG AAGACCATCC TGCCCGAAGA CAAAGGCTTT
TCGGGCGTGG TGTTCAAGGT GCAGGCCAAC ATGGACGCCA ACCACCGCGA CCGCATCGCC
TTCGTGCGCG TGGCCAGCGG CAAGTACACG CCCGGCATGA AGCTCAAGGT CCAGCGCACC
GCCAAGGAAC TGCGCCCCAC CAGCGTGGTC ACCTTCATGA GCCAGCGCCG CGAGGCGGTG
GAAGAGGCCT ACGCCGGCGA CATCATCGGC TTCACCACGC ACGGCGGCGT GCAGTTAGGC
GACACCATCA CCGACGGTGC CAACCTGCAG TTCACCGGCC TGCCGTTCTT CGCACCCGAG
ATGTTCATGA CCGTGGTGCT GAAGAACCCG CTGCGCACCA AGCAACTGCA GCAGGGCCTG
ATGCAGCTGG GCGAGGAAGG CGCCATCCAG GTCTTCAAGC CCGAAGCCGG CGGCAACATG
CTGCTGGGGG CCGTGGGCCA GCTGCAGTTC GAAGTGGTGC AACACCGTCT GAACACCGAA
TACGACTGCG ACATCCGTCT GGAAGCCTGC CAGTACACGG GAGCCCGCTG GATCACTGCC
GACACGCCGG CCGAACTGCG CGAGTTCGAG AACGCCTACC CCATGCGCAT GGCGCGCGAT
GCGGCGGACA CGCTGGCCTA CCTGTGCACG AGCCCATATG ACGTACGGCT GGCGCAGGAG
CGGTTCCCGA AGATTCACTT CCATCCGCTG CGGGAGCATG CGGGGTTGGC GTTGCAGAAC
AGTTGA
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| Protein sequence | MSYAPETRRR RTFAIISHPD AGKTTLTEKL LLFSGAIQIA GAVKGRKASR HATSDWMEIE
KQRGISVASS VMQMSYRDHV INLLDTPGHK DFSEDTYRVL TAVDSALMVI DAANGVEAQT
RRLIEVCRQR DTPIITFVNK MDREVRDPLD ILDEVERELG MPCCPITWPV GQGKSFGGII
NLRTQSMTVF QPGSEKRPQD FEVIPLADAD KLRARFGQAF DDALESMELA QGASAPWDHE
AFLAGKLTPV FFGSGVNNFG VMEVLDAVVD MSPPPGPRKS SLVVNKQTVE KTILPEDKGF
SGVVFKVQAN MDANHRDRIA FVRVASGKYT PGMKLKVQRT AKELRPTSVV TFMSQRREAV
EEAYAGDIIG FTTHGGVQLG DTITDGANLQ FTGLPFFAPE MFMTVVLKNP LRTKQLQQGL
MQLGEEGAIQ VFKPEAGGNM LLGAVGQLQF EVVQHRLNTE YDCDIRLEAC QYTGARWITA
DTPAELREFE NAYPMRMARD AADTLAYLCT SPYDVRLAQE RFPKIHFHPL REHAGLALQN
S
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