Gene Dtpsy_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_0588 
Symbol 
ID7382962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp608446 
End bp609345 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content62% 
IMG OID643653899 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002552068 
Protein GI222109804 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGC ATTTGCTGGC CGCAGCCATT ACCGTCCTGG CCGCTGGTAG CGCGTTCGCA 
CAGGCCAACG ACACCCTGGC CAAGATCAAA TCTACGGGTG CCGTGACGCT GGGCGTGCGC
GAGTCCTCGG GCCTGGGCTA CACCCTGGGC AACGGCAAGT ACGTGGGCTT CCACACCGAG
ATGGGTGAGC GCATCCTGGC CGACATCCAG AAGCAGCTGG GCCTGGCCAA CATGGAGATC
AAGTACCAGC CGGTGACCTC GCAGAACCGC ATTCCGCTGG TGACCAACGG CACGGTGGAC
ATCGAGTGCG GCTCCACCAC CAACAACACC GCACGCCAGA AGGACGTGGC CTTCGCCGTG
ACCACCTACG TGGAAGAAGT GCGCATCGCC GTGAACGCCA AGTCGGGCAT TACCGGCATC
AAGGACCTGA ACGGCAAGAC CATCGTCACC ACCACCGGCA CGACGTCGGT GCAGACGCTG
CGCAAGAACA AGCGCGCCGA TGGCCTGACT TTCAAGGAAG TCATGGGCAA GGACCACGCC
GACAGCTTCC TGATGCTGGA GACGGGCCGT GCCGACGCCT TCATCATGGA CGGCTCCATC
CTGGCGGCCA ACATCTCCAA GTCCAAGAAC CCTGCCGATT TCAAGATCGT GGGTGAAGTG
CTGTCGGTGG AGCCCATTGC CTGCATGCTG CGCAAGGACG ACCCCGCCTT CAAGAAGGCC
GTGGACGATT CCATCAAGCG CCAGATCGCA GATGGCAGCC TGGCCAAGCT GTACGACAAG
TGGTTCATGC AACCCATCCC GCCGGCCAAC GTGAAGATCG GCCTGCCGCT GTCCGAAGCT
ACGAAGAACG CATGGGCCCA CCCCAACGAC AAGCCCATGG AGTCGTACGA AGTCAAGTAA
 
Protein sequence
MKKHLLAAAI TVLAAGSAFA QANDTLAKIK STGAVTLGVR ESSGLGYTLG NGKYVGFHTE 
MGERILADIQ KQLGLANMEI KYQPVTSQNR IPLVTNGTVD IECGSTTNNT ARQKDVAFAV
TTYVEEVRIA VNAKSGITGI KDLNGKTIVT TTGTTSVQTL RKNKRADGLT FKEVMGKDHA
DSFLMLETGR ADAFIMDGSI LAANISKSKN PADFKIVGEV LSVEPIACML RKDDPAFKKA
VDDSIKRQIA DGSLAKLYDK WFMQPIPPAN VKIGLPLSEA TKNAWAHPND KPMESYEVK