| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0584 |
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| Symbol | |
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| ID | 7382958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 604200 |
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| End bp | 605498 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643653895 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_002552064 |
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| Protein GI | 222109800 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCCA CGCTGCTCTT CGTCGCCTTC CTGGTGCTGA TGTTTGTGGG TGTGCCCATC
GGTGCCGCCC TGGGGTTGGC CGGCGCCGCC GCCATTGCGC TGGCCAATGC CGAGACGCAA
TGGTTTGGCC TGCTCGCCGT GCCGCAAAAC TTCTACGCAG GGCTGGGCAA GTACCCGCTG
CTGGCGATTC CCATGTTCGT GCTGGTGGGC TCGATCTTCG ACCGTTCGGG AGTGGCGCTG
CGCCTGGTGA ACTTTGCTGT GTCCATGGTC GGGCGCGGAC CGGGCATGCT GCCGCTGGTG
GCGATTGCCG TGGCCATGTT CCTGGGCGGC ATCTCCGGCT CGGGACCGGC CAACGCGGCC
GCCGTGGGCG GGGTGATGAT CGCGGCCATG AGCCGCGCGG GCTACCCCGG CAGCTTCTCG
GCGAGTGTGG TGGGGGCGGC CGCAGCCACG GACATCCTCA TCCCGCCTTC GGTGGCGTTC
ATCATCTATT CGGTGCTGGT GCCCGGGGCC TCGGTGCCGG CCTTGTTCGC GGCGGGCATG
GTGCCGGGCG TGCTGGCGGG CATTGCGCTC ATCGTGCCGG CCGTGTGGAT GGCGCGCCGC
CACCGCATGG GCCACCTGGA AGCCGACATG CCCCGCCCGC CGTTCTGGCG CAGCCTGCGC
GAAGCCTCCT GGGGCCTGGC CGCGCCGGTG CTGATCCTGG GCGGCATGCG CGCGGGCTGG
TTCACACCCA CCGAGGCCGC CGTGGTGGCC GTGTTCTACG GCCTGTTCGT GGGCATGGTG
ATCCACCGCA CCATTCAGGT GCGCGACCTG TTCACCATCC TGCGCGAAGC GGGCGAGCTG
TCGGCCGTGA TCCTGATCGT GGTGTCGCTG GCGGGCATCT TCGCGTTCTC ACTGTCCACA
CTGGGCGTGA TCGACCCGGT GGCCAACGCC ATCGTGAACT CCGGCCTGGG CGAATACGGC
GTGCTGGCGC TTTTGATCCT GCTGCTCATC ACCGTGGGCA TGTTCCTGGA CGGCATCTCG
ATCTTCCTGA TCTTCGTGCC GCTCTTGCTG CCCATCATGC AGCACTACCA GTGGAACCCG
GTGTGGTTCG GCGTGATCCT CACCCTGAAG GTCGCACTGG GCCAGTTCAC GCCGCCGCTG
GCCGTGAACC TGATGGTCAG CTGCCGCATC GCAGGCGTGC GCATGGAGTC CACCGTGCGC
TGGGTCGGCC CCATGCTGCT GGCCATGTTC CTGGTGATGG TGGCCGTGAT CGCCTTCCCG
CAGCTGGCCC TGTGGCTGCC TGCCCAGCTG GGCTATTGA
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| Protein sequence | MIATLLFVAF LVLMFVGVPI GAALGLAGAA AIALANAETQ WFGLLAVPQN FYAGLGKYPL
LAIPMFVLVG SIFDRSGVAL RLVNFAVSMV GRGPGMLPLV AIAVAMFLGG ISGSGPANAA
AVGGVMIAAM SRAGYPGSFS ASVVGAAAAT DILIPPSVAF IIYSVLVPGA SVPALFAAGM
VPGVLAGIAL IVPAVWMARR HRMGHLEADM PRPPFWRSLR EASWGLAAPV LILGGMRAGW
FTPTEAAVVA VFYGLFVGMV IHRTIQVRDL FTILREAGEL SAVILIVVSL AGIFAFSLST
LGVIDPVANA IVNSGLGEYG VLALLILLLI TVGMFLDGIS IFLIFVPLLL PIMQHYQWNP
VWFGVILTLK VALGQFTPPL AVNLMVSCRI AGVRMESTVR WVGPMLLAMF LVMVAVIAFP
QLALWLPAQL GY
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