Gene Dtpsy_0562 details

Gene Information

• Locus tag: Dtpsy_0562
• ID: 7382853
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: -
• Start bp: 579679
• End bp: 581529
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643653873
• Product: glycosyl transferase family 2
• Protein accession: YP_002552042
• Protein GI: 222109778
• COG category: [M] Cell wall/membrane/envelope biogenesis; [R] General function prediction only
• COG ID: [COG0438] Glycosyltransferase; [COG1216] Predicted glycosyltransferases

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAGTA AAGCACGCAC GCCCATCGCG ATCATCATCC TCACCTGGAA CGGGCTGGCG 
CTTACGCGGT GCTGCATCGA AACGCTCCAC CTCGACAACC TGCCTGACCA CGTCAGCGTC 
ATCGTGGTCG ACAATGGAAG CACCGATGGC AGCGTCGAAT ACTTGCGCAG TCTGCCAAGG 
CTGACTCTGA TCGAGAACGG CCAGAACCTT GGCTACGCAC GCGCCGTCAA CATCGGAATC 
CGGGCAGCTG CTCCCAATGC CGACATCGTG CTCCTGAACA ACGACGTTGA GTTGATTGAG 
CCGGACTGGC TCGATCGCCT CTCGGAAGTG GCCGCCAGCG ACCCTGCGAT TGGCGTCATA 
GGAGTGAAGA TCCTGCGAGA GAACGGCACC CTCCAACATT GCGGCGCCTA CCTGCCGCTG 
GACACGATGT GGGGCCAGCA ACTGGGCGGC GGTGAAGTAG ACATCGGCCA GTATGCCGGT 
GTACGAGACG CAGAGAGTGT CGTATTTGCC TGCGCCCTCA TCAAGCGAGC GGTAATCGAG 
AAAGTTGGAC TGCTCAGCGA GGACTTCTTT GCCTATTTCG AGGATACTGA CTACTGCCTG 
CGCACGGAAC TCGAGGGCTT CCGCGTCGTG GTCTGCGGCG ATATCCGTGT GCGCCACGCC 
GAAAATTCAA GTACCAAGAT CAACGGTGTC AGTCACAGCG CAATCTTCCT GAAAAGCCAG 
GACACCTTCA AGCGCAAGTG GGGCGAATAC CTTGGCCACA CGCGCTACAC ATCCGAGATG 
GACTGGCATT CGATTGTCAA CTTCCCGTCG GGGTATGCCG GCTCATCGCG CAGCTTTATA 
TTGGCACTGG ACCAGCTTGG TGTCTCGGTC GCCTACAAAT ATGTGTACGG ACCCGGCACC 
GTCTTCCCTA CCTCGGAACC CGAGCACTCA GATTCATACG TCGTGAACAT GATACGCAGC 
CGCGAGTTCG GCCGTGCCGA CGTACAGGTG GTGTACGCGC AGGGCGACGT GTTCGCTCGC 
AATACCGGAA AATACCGGAT AGGCTTCACC ATGCTGGAAG TCGATGGGCT GCCCCCCGAG 
TGGGTGCGCC AAGCCAACAT GATGGACGAG GTGTGGGTAC CATCGACCTT CAACGAGCGC 
ACGTTTCGCG ACTCCGGTGT CAAGGTACCG ATTCGCGTCG TGCCTCTGGG GGTCGACACC 
GCATACTTCT CGCCGCAAAT TCGCTCGGTC AAACAACCCG ATGTCTACAC GTTCCTGTCC 
GTGTTCGAGT GGGGCGAGCG CAAGGCGCCC GAAGTACTGC TGCAAGCCTT CTCCGACGAG 
TTCAGTGCCG ATGAGCCGGT GCGCCTCGTA TGCAAGGCAA ACAACTTCGA CCCGTCGTTC 
CGCATTTTCG ACAAGGTCGC TGAGCTGGCG CTGCGCTCCA ACGGGGGACG TATCGTCATG 
GCCGAGAACC AGATCCTGCA GCAGTACGAA CTAGCCGTTC TGTACCGGTC CGCGGATTGC 
TTTGTTCTGC CCACCCGGGG CGAAGGTTGG GGAATGCCGA TCCTCGAAGC GATGGCGTGC 
GGCCTCCCCG TCATCGCGAC CAACTGGAGT TCCCAGACCG ACTTCATGAC AGAGCAGAAC 
TCGTTACCAC TCGAAGTCGA GCGGCTGGTC CCGGCCGAAG CCAAGTGCCC CTACTACGAG 
GGTTTCCGCT GGGCTCAGCC GTCCTACGAA CATCTGCGCA AGCTGATGCG ATGGACGTTC 
GAACACCAGG ACGAGGCTCG CGCGATTGGC CTACGAGCCG CCGCTGACGC GGCGCAGCGC 
TGGACATGGA ACGCGTCGGC GCGCCACATG ATTAATCTCA TCTCGGCATA G 

 

Protein sequence

MPSKARTPIA IIILTWNGLA LTRCCIETLH LDNLPDHVSV IVVDNGSTDG SVEYLRSLPR 
LTLIENGQNL GYARAVNIGI RAAAPNADIV LLNNDVELIE PDWLDRLSEV AASDPAIGVI 
GVKILRENGT LQHCGAYLPL DTMWGQQLGG GEVDIGQYAG VRDAESVVFA CALIKRAVIE 
KVGLLSEDFF AYFEDTDYCL RTELEGFRVV VCGDIRVRHA ENSSTKINGV SHSAIFLKSQ 
DTFKRKWGEY LGHTRYTSEM DWHSIVNFPS GYAGSSRSFI LALDQLGVSV AYKYVYGPGT 
VFPTSEPEHS DSYVVNMIRS REFGRADVQV VYAQGDVFAR NTGKYRIGFT MLEVDGLPPE 
WVRQANMMDE VWVPSTFNER TFRDSGVKVP IRVVPLGVDT AYFSPQIRSV KQPDVYTFLS 
VFEWGERKAP EVLLQAFSDE FSADEPVRLV CKANNFDPSF RIFDKVAELA LRSNGGRIVM 
AENQILQQYE LAVLYRSADC FVLPTRGEGW GMPILEAMAC GLPVIATNWS SQTDFMTEQN 
SLPLEVERLV PAEAKCPYYE GFRWAQPSYE HLRKLMRWTF EHQDEARAIG LRAAADAAQR 
WTWNASARHM INLISA