| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0530 |
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| Symbol | |
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| ID | 7382821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 546522 |
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| End bp | 548825 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643653841 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002552010 |
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| Protein GI | 222109746 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.898854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTCCT CCCCTCTCAA GAAGCCCAAG AGCCTGCGCA TGGCCGCAGC CCTGCTGCCG
CTGAGCGCCA TCGCCCAGGT GCAGCCCACA CCCGCCCCCG TCACCACCCT GCCCACGGTG
ACGGTGCAGG AGCAGGCCAT CGATCCCAAC CCCAACGCCG AGGTCGGCGC GCCCTACAAG
GCCAAGACCT CCGCCGACAC GCGCCACACC CGCCCGCTGG CCGAGACGCC GCAGACCATC
CAAGTGGTCA CCGGCGAGGC CATCCGCGAC TCCGGCGCCA CCGACCTCAA GCAGATCCTG
GCCGCGCAGC CCGGCATCAC CCTGGGCACG GGCGAAAACG GCAACGCCTT TGGCGACCGC
TACATCATCC GCGGCCAGGA GGCGCGCTCG GACGTGTTCG TGGACGGCCT GCGCGACCCC
GGCATGACCA CGCGCGAGAG CTTCGCCATC GAGCAGGTGG AAGTCACCAA GGGCCCCAAC
TCCAGCTTCG CGGGCCGCGG CTCGGCGGGC GGCGCGGTGA ACGCCGTGAC CAAGCAGGCC
ACGCTGGACT ATGACTTCAC GCGCGTGTCC GCCGGCGTGG GCACCGACAG CCACCACCGC
GTGACGCTGG ACATGAACAA GGGCTTCACC GACAAGTTCG CCCTGCGCGC CAACGCCCTG
ACCTCGGGCG AGGACGTGCC GGGCCGCAGC CCCTCGCAGC GCCGCCGCGA CGGCCTGGCG
CTGTCGGGCC TGTGGGAGCT GAACCAAGAC CTGTCCGTCA CGCTGGACTA CTACGGCCTG
CGCGCCAAGG ACAAGCATCC CGACCTGGGC GGCTACCTCG TGGGCACGGT GCCCAACCGC
CGCCCCGCCA CGGGTGTGCC GGTCTATGCG CAGAACAGCG ACTTCCTGAA TTCCGACGTG
GACACGGTCA CCGCGCGCAT CGCCTACCGC TTTGCGCCCG ACCTCAAACT CACCAGCCTG
ACGCGATACG GCCAGTCGGA CAACCGCTAC GCCACCACGG GAGCCTCCAA CGGCACGGTG
CTGGACGCGG CCAACAACCC GATCGGCACG GCCGGCGTGC TGGACGGCGG CCACACCGGC
TGGCAGGACG TGAAATATTT CGCGCACCAG AGCAACCTGC GCTGGGACAA GCAGATCGGC
AGCCTCAAGC ATGAATTCAT CTTCGGCTTC GAATACACCG ACCACAAGGT GAAGTCCGGC
AACTACGGCG TGACCAACAC CGGCGCCACC AACTGCCGCG TTTCGGGCCG CAACGGCCCG
CAGGCCGGCT GGTGCATCAC TGATCTGAAC GGCAACCCCG TGAGCAACCT GGGCGACCTG
GCCGGCCGCA GCTACGAACG CCGCAGTTGG ACACGCGACT GGCGCGTGAA GACCTTCGCG
CTGTCGGCCA TGGACACGGT GGACCTGACC GACCAGTGGA CCGTGTTCGG CGGCCTGCGC
GCCGACCACT ACGACCTGTC GCTGGACACC CGCAACAACC AGACGGGCGC GATCACGGGC
AACTACGGCT TCAACGACAC ACTGCTCAAC GGCCACCTGG GTGTGAGCTA CAAGATCAAC
CCCATGGGTA TGGTCTATGC AAGCTACGGC ACGGCGCAGG ACATCAACGG CGGCGAACCC
GACACCGGCA CGAGCAGCGG CTACGGCGGC CTGGTGATCC ACAACGGCAG CGCCGCCGGC
GCCAAGCCCG AGACCTCGCA GAACATCGAG CTGGGCACCA AGTGGAACCT GCTGGACGAC
AAGCTGCTGG CCACCGCCGC CGTGTTCCAG ACCACCAAGG ACGACGTGAT GGAGGGCGCC
AACTACGACA CTGAAGGCAC CTTCAATACC GGCAAGAACC GCGTGCGCGG CATCGAACTG
GGCCTGGCCG GCAATCTCAC CAAGAACTTC CAGCTGCAAG CCGGAGCGGC GATCATGAAA
TCCAAGGTGC TGCGCTCGGC CGTGGCGTCC AACGTGGGCA ACCCGCTGTC CAACTTCGCC
GACCGCTCCT TCACCGTACA GGGCAAGTAC CAGCTCACGC GCGACTTCTC CTTCGGCGCC
GTGGCGCGCT ACGAGAGCAG CCGCTGCGGC GGCCAGCCCG ACACCGGCGC CGGCTACACC
AACGGCATGT GCTCGCAGCC GGTGCCCTCG TTCAGCGTGT ACGACCTGTT CGCGTCCTAC
CGCATCAACA AGCACGCCGA CCTGCGCCTG AACGTGCTGA ACGTGACCGA CAAGGACTAC
TACACCGCCG TGTACCGCTC GGGCGCCTTC CTGTACAAGG GCGACGGCCG CGCAGTGCGC
CTGACGCTGA ACCTGGACTT GTAA
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| Protein sequence | MPSSPLKKPK SLRMAAALLP LSAIAQVQPT PAPVTTLPTV TVQEQAIDPN PNAEVGAPYK
AKTSADTRHT RPLAETPQTI QVVTGEAIRD SGATDLKQIL AAQPGITLGT GENGNAFGDR
YIIRGQEARS DVFVDGLRDP GMTTRESFAI EQVEVTKGPN SSFAGRGSAG GAVNAVTKQA
TLDYDFTRVS AGVGTDSHHR VTLDMNKGFT DKFALRANAL TSGEDVPGRS PSQRRRDGLA
LSGLWELNQD LSVTLDYYGL RAKDKHPDLG GYLVGTVPNR RPATGVPVYA QNSDFLNSDV
DTVTARIAYR FAPDLKLTSL TRYGQSDNRY ATTGASNGTV LDAANNPIGT AGVLDGGHTG
WQDVKYFAHQ SNLRWDKQIG SLKHEFIFGF EYTDHKVKSG NYGVTNTGAT NCRVSGRNGP
QAGWCITDLN GNPVSNLGDL AGRSYERRSW TRDWRVKTFA LSAMDTVDLT DQWTVFGGLR
ADHYDLSLDT RNNQTGAITG NYGFNDTLLN GHLGVSYKIN PMGMVYASYG TAQDINGGEP
DTGTSSGYGG LVIHNGSAAG AKPETSQNIE LGTKWNLLDD KLLATAAVFQ TTKDDVMEGA
NYDTEGTFNT GKNRVRGIEL GLAGNLTKNF QLQAGAAIMK SKVLRSAVAS NVGNPLSNFA
DRSFTVQGKY QLTRDFSFGA VARYESSRCG GQPDTGAGYT NGMCSQPVPS FSVYDLFASY
RINKHADLRL NVLNVTDKDY YTAVYRSGAF LYKGDGRAVR LTLNLDL
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