Gene Dtpsy_0520 details

Gene Information

• Locus tag: Dtpsy_0520
• ID: 7382811
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 537416
• End bp: 537853
• Gene Length: 438 bp
• Protein Length: 145 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643653831
• Product: thioredoxin
• Protein accession: YP_002552000
• Protein GI: 222109736
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG3118] Thioredoxin domain-containing protein
• TIGRFAM ID: [TIGR01068] thioredoxin; [TIGR02098] MJ0042 family finger-like domain

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.609436
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTCCC CCGAAGCACT GCACGTCGTC TGCCCCCACT GCCACACCAC CAACCGCGTG 
CAGGCCGCGC AACTGGGCAG TGCGCCCGAC TGCGGCAGCT GCCATCGGCC ACTGTTCACG 
GGCGAACCGC TGGCGCTGGA TGCGGCCAGC TTCGACCGGC ACGTAGCGCG CAGCCATCTG 
CCCGTGGTGG TGGACTTCTG GGCGCCGTGG TGTGGCCCCT GCCGCCAGAT GGCGCCAGCC 
TTCGCTCAGG CTGCGCGCGA GTTGGAGCCG CGCGTGCGGC TGGCCAAGCT GGATACCGAG 
GCGCACCCCG CGATCGCGGC GCGCTACGGC ATCCGCAGCA TCCCGACGAT GATCCTGTTT 
CGCGGCGGAC AGGAGGCAGC GCGCATCTCT GGTGCGCTGG GTGCGGCCGA TATCGCGCGC 
TGGGTGCAGT CGGTGTAA 

 

Protein sequence

MSSPEALHVV CPHCHTTNRV QAAQLGSAPD CGSCHRPLFT GEPLALDAAS FDRHVARSHL 
PVVVDFWAPW CGPCRQMAPA FAQAARELEP RVRLAKLDTE AHPAIAARYG IRSIPTMILF 
RGGQEAARIS GALGAADIAR WVQSV