Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0501 |
Symbol | |
ID | 7382792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 520100 |
End bp | 521281 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643653813 |
Product | alanine racemase domain protein |
Protein accession | YP_002551982 |
Protein GI | 222109718 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.249902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGATCCA CTCCTGAGCA TCTGCCCGAA CATCTGCGCG CCACCATCGG GCTGCGCGTG GATCTGATCG ACACGCCCGC ACTCGTCGTC GACCTGGATG CCATGGAGCG CAACATCCAG CGCATGGCCG AATTTGCGCA CAAGCACCAG GTGCGCTGGC GACCCCACGC CAAGATGCAC AAGAGCGCCG AGATCGCCCT GCAGCTGGAA AAGGCCGGCG CGCGCGGCCA TTGCGTGCAG AAGGTGTCCG AGGCCGAGGC GCTCGCCGCC GGCGGCGTGG CCGACCTGTA CATCAGCAAC GAGGTACTGG GGGGAGCCAA ACTATTGCGC GCGGCACGCC TGGCCGCGCA ACTGGCCGCA CGCGGCGGGC GGCTGGGCAT CGCGGTGGAC AGCGAAGAGG GCATCACCCG CCTGTCCGAG GCCATGCGCG TGGCGGGCAG CGACGCCGGC ATCGACGTGT TCGTGGAGAT CGACGTCGGC CAGGGCCGCT GCGGCGTGCC GCCCGGCCCG GCGGCGCTCG CCCTGGCCCA GGCCGTGGCA GCCCAGCCGC GCCTGCATTT CGCGGGCCTG CAGGCTTACC ACGGCAGCGC ACAGCACCTG CGCAGCGCGG CCGAGCGGCG CGCGGCCATC GCCCACGCAG TGCAGGCCGC CGCCGATACC CGCGCGCTGA TCGAGGCCGC GGGCCTGCCC GTGCCGCTGG TCACGGGCTC CGGCACCGGC ACGCTGGTGC ACGAGGCCGC CAGCGGGGTG TATGGAGAAC TGCAGGCCGG CTCGTTCCTC TTCATGGACG CGGACTACGC CGCCAATGAA CGCGAAAGCG CCCAGCCCGC CTTCGAGCAT GCGCTGTTCG TGAAGACGCA GGTGATCTCT GCGCGACCCA CGCATGTGGT GTGCGACGCA GGGCACAAGA GCCACGCCGT CGACTCCGGC ATGCCGCTGG TCTGGGGACT GCCGCCCGAG CGCGCCCTGC GCTATGCCAA CGGCGGCGAC GAACACGGCG TCCTGCACGC AACTGGCCCC AAGGCGCGCC TGCCGGCCCT GGGCCGCATG CTGTGGCTGG TACCCGGCCA CTGTGACCCC ACGGTGAACC TGCACGACTA CCTGATTGGC GTGCGCGGCG GCCTGGCGCA CGGCGTGGTG GAGCGCGTCA TCCGCGTGGA TGCACGGGGC GCCGTGACGT AA
|
Protein sequence | MRSTPEHLPE HLRATIGLRV DLIDTPALVV DLDAMERNIQ RMAEFAHKHQ VRWRPHAKMH KSAEIALQLE KAGARGHCVQ KVSEAEALAA GGVADLYISN EVLGGAKLLR AARLAAQLAA RGGRLGIAVD SEEGITRLSE AMRVAGSDAG IDVFVEIDVG QGRCGVPPGP AALALAQAVA AQPRLHFAGL QAYHGSAQHL RSAAERRAAI AHAVQAAADT RALIEAAGLP VPLVTGSGTG TLVHEAASGV YGELQAGSFL FMDADYAANE RESAQPAFEH ALFVKTQVIS ARPTHVVCDA GHKSHAVDSG MPLVWGLPPE RALRYANGGD EHGVLHATGP KARLPALGRM LWLVPGHCDP TVNLHDYLIG VRGGLAHGVV ERVIRVDARG AVT
|
| |