Gene Dtpsy_0489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_0489 
Symbol 
ID7382780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp504827 
End bp506236 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content66% 
IMG OID643653802 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionYP_002551971 
Protein GI222109707 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATCT CTTCAGGCGC GTCGCCTGCC CCGTCCGCCA CCGCCTTCTC ATCGCTGCCT 
CTGTCCCCTG AAATGCTGGC CAACCTGCAG CAGCTGGGCT ATGCGCAGAT GACGCCCATC
CAGGCCGCCA GCCTGCCTTT CAGCCTGCAG GGCCGTGATC TGATCGCCCA GGCCAGCACC
GGCAGCGGCA AGACAGCGGC CTTTGGCTTG GCCATGGTCG ATCGGCTGAA CCCGCGCTGG
TTCGCCGTCC AGGGCCTGGT GCTGTGCCCC ACGCGCGAGC TGGCCGATCA GGTGGCCACC
GAGATCCGCC GCTTGGCGCG TGCGCAAGAC AACATCAAGG TCGTCACTGT GTATGGGGGC
GTGCCTTCGC GCGGCCAGAT TGCTTCGCTG GAGAACGGTG CCCACATCGT GGTGGGCACG
CCGGGCCGCG TGATGGACCT GATGGAGCGC GGCAAGCTCG ACATCGCCAA ACTCAAGACC
TTGGTGCTTG ACGAGGCCGA CCGCATGCTG GACATGGGCT TCCTGGCCGA TATTGAGACC
GTGGTGCGCC AGTGTCCGGC CGAGCGCCAG ACCCTGCTGT TCTCCGCCAC CTATCCCGAC
GGCATTGCGG GACTGGCACA GCGTTTCATG CGCGCGCCCC AGATGGTGAA GGTGGCCGCC
CAGCACGGTG CAGGCAAGAT CGCGCAGCGC TGGTATGAGG TGGATGCACG CGAGAAGGTC
GACGTGGTGG CGCGCATGCT CGCGCACTTT CGCCCTGCGT CGAGCATTGC CTTCTGCAAT
ACCAAGCAGC AGTGCCGTAA CGTGGTGACT GCGCTGCAGA GCCAGGGATT CAGTGCCCTC
GCCCTGTTTG GCGAGTTGGA GCAGCGCGAG CGTGACGAGG TGCTGGTGCA GTTTGCCAAC
AAGAGCTGCA GCGTGCTCGT GGCCACCGAC GTGGCGGCGC GCGGCATCGA TATTGCCGAC
CTCTCGGCCG TGATCAACGT CGATGTGACG CCCGATCCCG AGGTGCACAT CCACCGCATC
GGCCGCACGG GCCGCGGCGA TGCCGAGGGG CTGGCGCTGA ACCTGGTCAG CATGGATGAG
ATGGGCAGCG TGGGCAAGAT CGAATTGCTG CAAGGCCGTG CCTGCGAGTT CTTTCCGGTG
GATGAACTCA CCCCCACGGC AGGGGGCGAA CTGCAGCCAC CCATGTGCAC CATCCAAATC
ATCGGCGGGC GCAGGGACAA GATCCGCGCC GGCGACGTGA TGGGCGCCAT GTGCGCCGAC
TTCGGCTATG CGCGCGAGCA GATCGGCAAG ATCAGCGTCA ACGATTTTTC CACCTACGTG
GCCGTGGACC GCGCCATCGC GGCCCAGGCC TGCGCCAAGC TGAATGCCGG CCGCGTCAAA
GGCAAGATGG TGAAGGCGCG CTTGCTGTAG
 
Protein sequence
MTISSGASPA PSATAFSSLP LSPEMLANLQ QLGYAQMTPI QAASLPFSLQ GRDLIAQAST 
GSGKTAAFGL AMVDRLNPRW FAVQGLVLCP TRELADQVAT EIRRLARAQD NIKVVTVYGG
VPSRGQIASL ENGAHIVVGT PGRVMDLMER GKLDIAKLKT LVLDEADRML DMGFLADIET
VVRQCPAERQ TLLFSATYPD GIAGLAQRFM RAPQMVKVAA QHGAGKIAQR WYEVDAREKV
DVVARMLAHF RPASSIAFCN TKQQCRNVVT ALQSQGFSAL ALFGELEQRE RDEVLVQFAN
KSCSVLVATD VAARGIDIAD LSAVINVDVT PDPEVHIHRI GRTGRGDAEG LALNLVSMDE
MGSVGKIELL QGRACEFFPV DELTPTAGGE LQPPMCTIQI IGGRRDKIRA GDVMGAMCAD
FGYAREQIGK ISVNDFSTYV AVDRAIAAQA CAKLNAGRVK GKMVKARLL