| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0486 |
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| Symbol | |
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| ID | 7382777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 501178 |
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| End bp | 503268 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643653799 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002551968 |
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| Protein GI | 222109704 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.885927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTCCC CTCGCCCCCC TGCCTCCCCC CCCCTGCCCG ACCTGGGCCC CCGCGCCAGT
GATGCGCTGC TGCGGCTCAT CGCCGACTCG GTGCCCGTCA TGCTGGCCTA TTACGAATCG
ACCAGCCTGC GCTGCGTGTT CGCCAACCAG CGCTATGCCG CCTTCAGCGG GCAAACGGTG
CAGAGCATCA TCGGCAAGAC GGTGCGCGAG GCGATCGGCG AAAAGGCCTG GCAGGAGATC
CTGCCCTACG TGCAGCGCGC GCTGGCTGGG GAGAGCGTTC AGTACACCCG CGAATACGCC
GGCCCGCAGG GGCGCGCGCA TATGCTGGAG ATCAGCCTGC AGCCGCACTT CGGGGTGCGC
GAAGGACGCA ACGCGATGGT GGGTGCATTC GTGCTCATCA ACGACATCAC CCACCACTGG
GAGGCCGAGC GCGCCGTGCG CCAGAGCGAG GAGCGCATGC GCAAGTTCGC CATCGCTACC
GAGGAGGGAC TTGCCTTTCA CCGCGACGGG CGCATTCTGG ATGCCAACGA AGCGCTGCAG
CGTATGGTCG GCTATTCGCT GGCCGAGCTC GTAGGCCAGT CCATCTTCGA TTTCGCGCTG
CCCGAGTACC GGGCGCTGGC CGTGGAATAC ACGCGCCGCG GCAGCGAGAA GCCCTACGAG
CTCGCCATGC GCCACAAGGA CGGCCGCGTG ATCCCGATCG AGGTGGTGGG CAAGACCATG
CCCCAGCAGG AGGGTGACTA CCGCGTGGTG GTGGTGCGCG ACATCACGGC GCGCAAGCAG
GCGCAGGAGC AGGCGCGCTT CCTGGTGCTG CATGACACGC TGACCCAACT GCCCAACCGG
CGCCACCTCA TGATGCAGCT GGCACGCATG GCGAGTGCCG CGCAGGAGCG GCAGACCCGC
GCCGCCGTGC TGTTCATCGA CCTGGACCAC TTCAAGACGG TCAACGAGTC GCTGGGAAAC
CAGGCCGGCG ACCAGCTGCT GATCGAGATT GCGCGGCGCC TGCAGGACGG GGTGAAGGCC
ACCGACTTCG TCGCGCGCGT GGGCGGCGAT CAATTCATCG TGCTGCTGCC CGACCTGGCC
AACCGCGCCG CAGCGGCCGA AGTAGCCGAT GCGCTGCTGG CGCGCGTGCG CGCCGAGTTC
GCCATCGGGG GCACGCCGCT GTCGCTGTCA CCCTCCATCG GCATCAGCGT CTTTCCGGAC
GACGGCTACA GCCCCGACGA GCTGCTGCGG CGCGCCGACG CGGCCATGCA CCACACCAAG
GAAAGCGGGC GGGGCACGCG CATGTTCTAT GAACCGGGCA TGGAAGGCCA ACCCACGGAG
CTGCTGCAGC AAGAGCACCT GCTGCGCGAG GCTGTGTTCC AAGGGGCCTT CGCACTGCAC
TACCAGCCCC AGGTGCGGGT GGCCGACGGC CGGCTGGTGG GCTTTGAGGC GCTGGTGCGT
TGGCGACACC CGGTGCGCGG CCTCGTGGGG CCGGATGAGT TCATTCCGCT CGCCGAGTCG
CGCGGTCTCA TCACGCCCAT TGGCCGCTGG GTGCTGCACG AAGCCTGTCG CCAGCTCAAG
GCATGGCACG ACGAAGGGCT GCCCCGGGTG CCGGTGGCGG TGAACCTCTC TGCCATCGAG
TTCCGCCAGC GCGACGTGGT GGGCGAGATC GCCCAGGTGC TGCAGTCCGC GGGGCTCGCA
CCGCAGTACC TGGAGGTGGA GATCACCGAA TCCGCCCTCA TGCAGCAGGC CGACCACACG
CGCACCACCC TGCAGGCCCT GCAGGCCCTG GGCGTTGCCG TAACGGTGGA CGACTTCGGC
ACGGGCTACT CGTCGCTGGC CTACCTCAAA CGCTACCCGC TGGACAAGAT CAAGGTGGAC
CGCTCCTTCG TCACCGACAC GCCTGCCGAC AGCGAAGACG TGGCCATCGT CACCGCCATC
ATCCAGCTCG CGCACAGCCT GCAGCTGCAG CCCGTGGCCG AAGGCGTGGA GACCGCGGAG
CAGCTCGCGC TGCTGCGGCG CCTGGGCTGC GAACTGGCGC AGGGCTTTGG CATCGCACCG
CCCATGGATG CGCAGCGCGC CCGCGAGTGG CTGCGCGCCC AGGCCGAGTG A
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| Protein sequence | MPSPRPPASP PLPDLGPRAS DALLRLIADS VPVMLAYYES TSLRCVFANQ RYAAFSGQTV
QSIIGKTVRE AIGEKAWQEI LPYVQRALAG ESVQYTREYA GPQGRAHMLE ISLQPHFGVR
EGRNAMVGAF VLINDITHHW EAERAVRQSE ERMRKFAIAT EEGLAFHRDG RILDANEALQ
RMVGYSLAEL VGQSIFDFAL PEYRALAVEY TRRGSEKPYE LAMRHKDGRV IPIEVVGKTM
PQQEGDYRVV VVRDITARKQ AQEQARFLVL HDTLTQLPNR RHLMMQLARM ASAAQERQTR
AAVLFIDLDH FKTVNESLGN QAGDQLLIEI ARRLQDGVKA TDFVARVGGD QFIVLLPDLA
NRAAAAEVAD ALLARVRAEF AIGGTPLSLS PSIGISVFPD DGYSPDELLR RADAAMHHTK
ESGRGTRMFY EPGMEGQPTE LLQQEHLLRE AVFQGAFALH YQPQVRVADG RLVGFEALVR
WRHPVRGLVG PDEFIPLAES RGLITPIGRW VLHEACRQLK AWHDEGLPRV PVAVNLSAIE
FRQRDVVGEI AQVLQSAGLA PQYLEVEITE SALMQQADHT RTTLQALQAL GVAVTVDDFG
TGYSSLAYLK RYPLDKIKVD RSFVTDTPAD SEDVAIVTAI IQLAHSLQLQ PVAEGVETAE
QLALLRRLGC ELAQGFGIAP PMDAQRAREW LRAQAE
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