| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0462 |
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| Symbol | |
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| ID | 7384049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 475712 |
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| End bp | 477445 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643653777 |
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| Product | Peptidoglycan-binding domain 1 protein |
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| Protein accession | YP_002551946 |
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| Protein GI | 222109682 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.388723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGCCG CCATGTACGC CCCGTTCTTC GGACTCGAAC ACCCGCCTTT TTCCATCGCG
CCCGACCCGC GCTACCTCTT CATGAGCGAG CGCCATCGCG AAGCCCTGGC CCACCTGCTG
TACGGCCTGG ATGCGGGCGG CGGCTTCGTG CTGCTCACCG GCGAGATCGG GACCGGCAAG
ACCACGGTGT GCCGCTGCTT CCTGGAACAG ATTCCGCCGC AGTGCAACGT CGCTTACATC
TTCAACCCGA AGCTCACGGT GCCTGAGCTG CTGCGCTCCA TCTGCGACGA ATTCGGCGTG
GCGCACCGCC CCGCCATACC GGGGGCGGAG ACCGTGAAGG ACTGCCTGGA CCCGCTCAAC
GACTTCTTGC TGCAGCAGCA CGCGGCGGGG CGCAACAACG TGCTCATCAT CGATGAGGCG
CAGAACCTCG CGCCCGATGT GCTGGAACAG CTGCGCCTGC TCACCAACCT CGAGACCAGC
GAGCGCAAGC TGCTGCAGAT CATCCTCATC GGCCAGCCCG AGCTGCGTGC AATGGTGGCG
GCGCCGGAGC TGGAGCAGCT CGCGCAGCGC GTGATCGCGC GCTACCACCT GGACGCCTTG
AGCGCCGACG AAACACGCCA GTACATCGCC CACCGCATGG CCGTGGCCGG GCTGCAAGGG
CCGCTGCCTT TTCAGCAGCG GGCGCTGGCG CGCGTGCACG CGCTCACGGG TGGCGTGCCG
CGGCGCATCA ACCTGCTGTG CGACCGTGCC CTGCTGGGTG CCTACGGCGC GGGTGTGCGC
GAGGTGACCG ATGCCATGGT GCGCCGCGCC GCGCGCGAGG TGTTCGATGC GCCCGCCACG
GCGCGCCCGC GCCCGGGCTC GGCAGGGCGC TGGCTCGCCG CTGGAACCGG CGGGCTGGTG
GGCGCGGCGG CGCTGGGCGG GCTGGCCTGG GCCCTGGGCT GGTGGCCGCT CGCAGACGGT
GGCGCCGGCT CCACACAGGC ACAGACACAG ACACAGAGGC CGGCCATCGC CGCGTCGGCT
GCGGCCGTGC CCGCGTCATC CCCCGCCTCG GCTGCTTCTG CACCCGACGC GCCGGCCCCG
CCAGCGCCCC CGCCGACGTT GGCGCAGTTC CTGGCCATCC AGCCCGTGGC GCAGGCGCCG
GCGGCCTGGC AGGCGCTGGC CCGGCAGTGG CAGGCGAGCG TGTCCGACGG CGCCGCGGAC
CCCTGCGCCG CGCTGGCGTC CGAGGGCCTG CGCTGCTACC GCAGCCGCCG CGCCAGCCTG
AACCTGCTGC GCCAGCTCGA CCGGCCCGTG CTGCTGATGC TGCGGCCCGC CGAGGGCGAT
GCGCAGGGCG AGGCCCTGGC GCCTGAGGTG GCGGTCTTGC TGCGCCGGCT GGATGACGGC
ACCGCCACGC TGGAAGGCGT GCAGGGCCAG ACGCTGCAGG TGCGCGTGAC GGAGCTTGCG
CCGCTGTGGC GCGGCGAGGT TGCCACGCTG TGGAAGGCCC CTGCCGAGCT GGCCGATTCG
GGCGACGTCA CCGCCACTGC CGCGGGCGCC GCTTGGCTGG ACCAGCAACT GGCGGCCGCC
GGCGCGGGCG CCGCCGCAGC CCGTACCGCA ACGCCCGCCG CGCGCCGCGC GCGCATCCAC
CAATTTCAGC TGGGCCAGGG CCTCACGCCC GATGGCCGCG CTGGTCCCTT GACCCTGATG
TTGCTCAACC GCGCCGCAGG CGTGCCGGAG CCGCGTTTGC TCAGCGGAGC CTGA
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| Protein sequence | MLAAMYAPFF GLEHPPFSIA PDPRYLFMSE RHREALAHLL YGLDAGGGFV LLTGEIGTGK
TTVCRCFLEQ IPPQCNVAYI FNPKLTVPEL LRSICDEFGV AHRPAIPGAE TVKDCLDPLN
DFLLQQHAAG RNNVLIIDEA QNLAPDVLEQ LRLLTNLETS ERKLLQIILI GQPELRAMVA
APELEQLAQR VIARYHLDAL SADETRQYIA HRMAVAGLQG PLPFQQRALA RVHALTGGVP
RRINLLCDRA LLGAYGAGVR EVTDAMVRRA AREVFDAPAT ARPRPGSAGR WLAAGTGGLV
GAAALGGLAW ALGWWPLADG GAGSTQAQTQ TQRPAIAASA AAVPASSPAS AASAPDAPAP
PAPPPTLAQF LAIQPVAQAP AAWQALARQW QASVSDGAAD PCAALASEGL RCYRSRRASL
NLLRQLDRPV LLMLRPAEGD AQGEALAPEV AVLLRRLDDG TATLEGVQGQ TLQVRVTELA
PLWRGEVATL WKAPAELADS GDVTATAAGA AWLDQQLAAA GAGAAAARTA TPAARRARIH
QFQLGQGLTP DGRAGPLTLM LLNRAAGVPE PRLLSGA
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