Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0443 |
Symbol | |
ID | 7384030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 455644 |
End bp | 456792 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643653758 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_002551927 |
Protein GI | 222109663 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.363055 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTCAA CGCGGTTGAG CCGCCGGCAA TTCTCGGCAG GGATGGGCGC GGCCCTGCTG ACCGGCGCAT CCCTGACGCG CGCGCAGAGC GACACGCGCA TTGTGCTGGG CCAATCCGCG GCCCTGACCG GGCCTGCCAG CCAATTGGGC CTGCAGTTCC AGGCGGGTGC CAAGCTGGCG TTCGACCAGG TCAACGCCCA GGGCGGCATC GGGCGGCGCA CCATCGAGCT GCGCTCGCTG GACGACGGCT ACGAGCCCGA CCGCTGCGCC GAGAACACGC GCCGCCTGAT CAATGAGGAC GTGCTGGCCC TCTTTGGCTA CGTGGGCACG CCCACCAGCC TGGCCGCGCA ACCACTGTTC ACGCAGACTA AGGTGCCATT CTTCGCGCCC GTCACGGGCG CGGAATCCCT GCGCCAGCCG TTCAACCGCC TGGCCTTTCA CGTGCGCGCC TCCTACGCCG ACGAGGCCGA GCTCATCGTG CGCCAGCTCA CCAACCTGGG GCTGGACCGT ATCGGCGTCT TCTACCAGGA CGACGCCTAC GGCAAGGCTG GCCTGGACGC CGTGACCCGC GCACTGGCCA CGCGCAAGCT GGCGCCCGTG GCGACCGGCA CGGTGGCGCG CAACTCCACC AACGTGACGG CTGCCGTGGC GCCGCTGGTG GCGGCGCAGC CCGTGGCCAT CGTGCAGATC GGTGCCTATG CCGCCAGTGC GGCGTTCGTG CTGGCCGCGC GCAAGGCGGG GTACGGCGGC AAGTTCTACA ACGTTTCCTT CGTGGGCACG CAGGCGCTGG CGGATGCGCT GGGCGCCAAC GGCGCGGGCG TGGTGGTGTC GCAGGTGGTG CCTTCGCCCT ACCAACAGTC GCGCCAGATC ACGCGTGAAT TCCAAGAGGC CATCAAGAAG GGCGGCAACG TGCAGGCCAA CTACTCCAGC ATGGAGGGCT ACCTGGCCGC GCGCGTCTTC ATCGAGGGGT TGCGCAACGC GCAGGCGCAC GCCAGCGGCA AGCTCACGCG CGAGAGCCTG GTGGCGGGGC TGGAATCCCT GCGCGGTTCG GTGGGCGGTT TTACGGTCAA CTTCAGCCCG TCCGACCATG AGGGCTCGCG CTTCGTGGAG ATGTCCATGC TCACCGGCGA CGGCCGCGTG CGCACCTGA
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Protein sequence | MHSTRLSRRQ FSAGMGAALL TGASLTRAQS DTRIVLGQSA ALTGPASQLG LQFQAGAKLA FDQVNAQGGI GRRTIELRSL DDGYEPDRCA ENTRRLINED VLALFGYVGT PTSLAAQPLF TQTKVPFFAP VTGAESLRQP FNRLAFHVRA SYADEAELIV RQLTNLGLDR IGVFYQDDAY GKAGLDAVTR ALATRKLAPV ATGTVARNST NVTAAVAPLV AAQPVAIVQI GAYAASAAFV LAARKAGYGG KFYNVSFVGT QALADALGAN GAGVVVSQVV PSPYQQSRQI TREFQEAIKK GGNVQANYSS MEGYLAARVF IEGLRNAQAH ASGKLTRESL VAGLESLRGS VGGFTVNFSP SDHEGSRFVE MSMLTGDGRV RT
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