| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0423 |
|---|
| Symbol | |
|---|
| ID | 7384010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 431593 |
|---|
| End bp | 433509 |
|---|
| Gene Length | 1917 bp |
|---|
| Protein Length | 638 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643653738 |
|---|
| Product | GAF sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002551907 |
|---|
| Protein GI | 222109643 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAACA AGTCCACGCT GTCCACCAAG CTGCTGGCCA TGGGCACGGT GTTCCTGCTG
GTGGCGCTGG CATCCATCGG CTTCACGCTG TGGGTGACCT GGAAGTTGGA GGGGGGCGCC
GCTGCGGTGA ACGAGGCGGG CCGCCTGCGC ATGAACATGC TGCGCATGGT GCTGGCCCAG
CAGAACGAGT CGCCCCAGGA ATTCGCGCGG CTGGAAACGC GCTTCAACGA AGGGCTGGAG
TTGCTGCGCA CGGGTGACCC CGCCCGGCCG CTGTTCGTGC CCTGGAGCGA TGACACGCGC
GAGCGCTACG AACACATCCG GCGGCAGTGG CTGCTCATCG AAAACGACTG GAAAGCCGCC
GCGCACTATG AAAGCACCGC CGCGGCCGTG GCGCGCGCCG ATGCCTTCGT GCTGGACCTG
GACAGCTTTG TCGAGGCCAT CGAGATCCAG ATCGTGCGCC TCACGGCGGT GCTGCATCTG
TTCCACCTGT TCATGGTGGC GTTGGCCATC GGCTCGGCTG TGGCCTTCAT GGCGCTGAGC
TACCTGCTCG TACTCAACCC CGTCACGCGG CTGCAACAGG CCCTGGCGCG GTTGCGCAAG
GGCGACCTGG GCACGCGCCT GGAGGTGGAA GCCGACGACG AGTTCGGCCA GCTGACGGCG
GGTTTCAACC TCATGGCCCA TGCGCTGCAG ACCTCGCATG AGGACCTGGA GCGCAAGGTA
CGCGAAAAGA CCGCCACCAT CGAAGTGCGC AACCAGCGCC TGGCGGCGTT GTATGCGGTG
AGCGCCCTTG CGGCGGAGGC GGGAAGCCTG GAAGAGTTGA CCCAGGGTTT CGTGCAGCAG
ATCCGCCGCG TGGCGGGGTG CGACGCGGCG GCTGTGCGCT GGTCGGACGA AGCCAACGAG
CGCTACGTGC TGCTGGCCTC CGACGGGCTG CCCCAGTCGC TGGTGGAACA TGAGCACTGT
GTGGTCACCG GCGCCTGCGA ATGCGGACAG GCGCAGGGCC AGGCGCGCAT GCGTGTGATT
CCGATCATGC CTGCCGGGGG CCTGCAGTTG CCGCATTGCC GCGAGGCCGG CTTCGAGACG
GTGGTGAGTA TCCCGGTGCA GATGCACCAG CGCCTGTTGG GTGAGGTCAC GCTGCTGTAT
CGCAGTCCGC TGGAGCTGTC GGCGGAGATG CGCGAGCTAC TGTCCACCAT GGCGCACCAC
TTGGCCACTT CCATGGAAAG CCTGCGCGCC TCGGCGCTGG AGCGCGAGGC AGCGGTGGCG
CAGGAGCGTA GCCTCATTGC GCGCGAATTG CACGACTCCA TCGCGCAGTC GCTGGCCTTT
CTCAAGATCC AAACCCAGCT GCTGCGCGAC GCGGTGGCGA AGGGCAACAC CGAGGCGCGT
GACCGCAGCA TGGCGGAGCT GGATACCGGT GTGCGCGAAT GCTATGCCGA CGTGCGTGAG
CTGCTGGTGC ACTTTCGCAC GCGCACGCAG GACGAGGACA TCGAAGCGGC GCTGCGCGCC
ACGCTCTCGA AGTTCGAACA CCAGACCGGC GCGGCCACGG CGCTGAGCAT GGCGGGGCAC
GGCCTGCCGC TGGCGCAGGA CGTGCAGATC CAGGTGCTGC ACATCCTGCA GGAGGCCTTG
TCCAACGTGC GCAAGCACGC CGATGCACGC CGCGTGGAGC TGCGGGTGCA GCGTCACCCC
CGCTGGCGCT TCGAGGTGCA GGACGATGGC CGCGGGTTCG ACCCGGACAG CGTGCCACCC
GATTCGCTGC ATGTGGGCCT GGGCATCATG CGTGAACGCG CGCAGCGCAT TGGTGCGCAT
CTGGAGCTGG TTTCGCGCCC CGGCGGCGGT GGCACCTGCG TAATCCTGGA GCTGCCACCA
ACCACCCGCG AGGAGCCTGC GTTGCCCCTC TCCCTTGTTT CTTCCGCCGC CGCATGA
|
|---|
| Protein sequence | MRNKSTLSTK LLAMGTVFLL VALASIGFTL WVTWKLEGGA AAVNEAGRLR MNMLRMVLAQ
QNESPQEFAR LETRFNEGLE LLRTGDPARP LFVPWSDDTR ERYEHIRRQW LLIENDWKAA
AHYESTAAAV ARADAFVLDL DSFVEAIEIQ IVRLTAVLHL FHLFMVALAI GSAVAFMALS
YLLVLNPVTR LQQALARLRK GDLGTRLEVE ADDEFGQLTA GFNLMAHALQ TSHEDLERKV
REKTATIEVR NQRLAALYAV SALAAEAGSL EELTQGFVQQ IRRVAGCDAA AVRWSDEANE
RYVLLASDGL PQSLVEHEHC VVTGACECGQ AQGQARMRVI PIMPAGGLQL PHCREAGFET
VVSIPVQMHQ RLLGEVTLLY RSPLELSAEM RELLSTMAHH LATSMESLRA SALEREAAVA
QERSLIAREL HDSIAQSLAF LKIQTQLLRD AVAKGNTEAR DRSMAELDTG VRECYADVRE
LLVHFRTRTQ DEDIEAALRA TLSKFEHQTG AATALSMAGH GLPLAQDVQI QVLHILQEAL
SNVRKHADAR RVELRVQRHP RWRFEVQDDG RGFDPDSVPP DSLHVGLGIM RERAQRIGAH
LELVSRPGGG GTCVILELPP TTREEPALPL SLVSSAAA
|
|---|
| |