| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0422 |
|---|
| Symbol | |
|---|
| ID | 7384009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 428981 |
|---|
| End bp | 431422 |
|---|
| Gene Length | 2442 bp |
|---|
| Protein Length | 813 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643653737 |
|---|
| Product | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
|---|
| Protein accession | YP_002551906 |
|---|
| Protein GI | 222109642 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGTG AAATCACCGA CCTTGCCCCC GCCCTGTCTA CACAACCCAT CAGCATGGAT
GTGCTGAAGG AGAAATACTT CAAAGACGGC GAGAGCGATG TCGAGGATCT GTTCCGCCGC
GTGGCGCGGG CGTTGGCCTC GGTCGAGCGC GAGGACATGC GCCAGGCCCT GGAGGCGCGC
TTCCTGGACA ACCTGCGTGC CGGCGCCATC GGGGCGGGGC GCATCATGAG CGCCGCCGGC
ACCGACATCC AGGCCACCCT CATCAACTGC TTCGTGCAGC CCGTAGGCGA CTGCATCCAG
GGCGTGGACG ACGCGGGCTA CCCCGGCATC TACGAGGCCC TGCGCGAGGC CGCCGAGACC
ATGCGCCGCG GCGGCGGCGT GGGCTACGAC TTCTCGCGCA TCCGCCCGCG CGGCGCGCTG
GTGAAGGGCA CGGCCTCCAT GGCCTCGGGC CCCTGCAGTT ACATCAACGT CTTCGACCAG
TCCTGCTCCA CGGTGGAGAG TGCGGGCGCG CGCCGCGGCG CGCAGATGGG CGTGCTGCGC
ATCGACCACC CGGACGTGCT GGACTTCATC ACCGCCAAGC GTACGCCGGG CCGCTGGAAC
AATTTCAATG TGTCCGTGGG CGTGCCCGAT GCCTTCATGG AGGCGGTGGA GCAGGACCGT
GATTGGGAGC TGGTGCATGG CGCCGCGCCC GGTGCGGAGC TGCAGGCCCA GGGCGCACAC
CAGCGTGCCG ACGGCCAGTG GGTGTACCGC ACGGTGCGCG CGCGCGAATT GTGGGACACG
ATCATGAAGT CGGCTTACGA CTTCGCTGAG CCCGGCATCC TGTTCCTGGA CCAGATCAAC
ACCGACAACA ACCTGCACTA CACCGAGACC ATCCAGGCGA CCAACCCGTG TGGCGAGCAG
CCGCTGCCGC CCTACGGCTG CTGCGACCTG GGCCCGATCA TCCTCACACG CTTCGTGCGC
AACCCGTTCG GGCTGCATGG CGAGGCGTCG TTCGACTTCG ATGCCTTCGA GCAGGCCGTG
GCCACCCAGG TACGCGCGCT GGACAACGTG CTGGACGTGA CCTTCTGGCC CCTGCCGCAG
CAGCAGGCCG AGTCGGCGGC CAAGCGCCGC ATCGGCGTGG GCTTCACGGG CATGGGTAAC
ACGCTGGCCA TGCTGTGCAA GCGCTACGAC CGCCGGGAAG GGCGCGACAT GGCGGTACAG
ATCGCCGAGC GCATGCGCAA CGCGGCCTAC CGCGCGTCGG TGGAACTGGC CAAGGAAAAG
GGCGCATTCC CCAAGTTCGA CGCCGATGGC TACCTGGCCA AGGGCACCTT CGCCAGCCGC
CTGCCCGCGG ACATCCAGAA GGCCATCCGC AAGCACGGCA TCCGCAACAG CCATCTGCTG
TCCATCGCGC CCACGGGCAC GGTGAGTCTG GCTTTCGCCG ACAACGCCTC CAACGGCATC
GAGCCGCCGT TCTCCTGGAG CTACACGCGC CGCAAGCGCG AGGCCGACGG CAGCAAGAGC
GAGTACGTGG TGGAGGACTA CGCCTGGCGT CTGTACAAGA CGCTGGGCGG CGACGTGAAC
CATCTGCCTG CGTATTTCGT GAGCGCCATG GACATGGCGG CCGCCGACCA CGTGGCCATG
ATGGAGGCCG TGCAGCCCTT CGTGGACACG GCGATCTCCA AGACCGTGAA CGTGCCCGAG
GACTACCCCT ACGCCGATTT CAAGGGCCTG TACATGCAGG CCTGGCACTC GGGCCTGAAG
GGCCTGGCCA CCTACCGGCC CAACAGCATC CTGGGCGCTG TGCTGGAAGT CACGCCCGCC
GCAGCGCCAG CCCCCGCCGC CGCACCCGAG GCTGTGCCCG CCCCGGTGGT GGTGGACCCC
ATGCGCACCA TGATCGAGAG CCGTCCCACG GGCGGCCTGT CGGCCGTGGC GGAGAAGCTG
GAGTACTGGA CGCAGGAAGG CCACAAGACG CTGTACCTGA TCGTCTCCTT CCTGCCCGTG
CCTGACGGGC GCGGCGGCAC GGTGGACCGC GCCATCGAGT TCTTCATGCC CGTGGGGCAG
AGCGGCGAAT CGCAGCAGTG GATCACCTCC AGCATGCGCC TGCTGTCGCT GGCCGCGCGC
GGCGGCTTCC TGGAGCGCGC GTTGTCCGAC ATGCGCAAGG TCGCCTGGGA CCGTGGCCCC
GTGCGCCTGG GCACGCACCA GAAGGCCGAC GGCACCCACG TGCCGCTGTG GCACGACTCC
GAGGTGGCCG CCATCGCGTA TGCCGTGCAG AACATCCTGG CCCAGCGTGC CATGCCGCAG
CAGCAGGTGC TGCCGCTGGA CGAGCCCGCC GCAGCGCCCG CGACCGGCAT GCCTCCGGCC
ATGGCCGGCA AGAAGTGCAA TGAGTGCGGT GCCCACGCCG TGATCCGCAA GGACGGCTGC
GACTACTGCA CCCAGTGCGG CGCCCTGGGC AGCTGCGGCT GA
|
|---|
| Protein sequence | MQREITDLAP ALSTQPISMD VLKEKYFKDG ESDVEDLFRR VARALASVER EDMRQALEAR
FLDNLRAGAI GAGRIMSAAG TDIQATLINC FVQPVGDCIQ GVDDAGYPGI YEALREAAET
MRRGGGVGYD FSRIRPRGAL VKGTASMASG PCSYINVFDQ SCSTVESAGA RRGAQMGVLR
IDHPDVLDFI TAKRTPGRWN NFNVSVGVPD AFMEAVEQDR DWELVHGAAP GAELQAQGAH
QRADGQWVYR TVRARELWDT IMKSAYDFAE PGILFLDQIN TDNNLHYTET IQATNPCGEQ
PLPPYGCCDL GPIILTRFVR NPFGLHGEAS FDFDAFEQAV ATQVRALDNV LDVTFWPLPQ
QQAESAAKRR IGVGFTGMGN TLAMLCKRYD RREGRDMAVQ IAERMRNAAY RASVELAKEK
GAFPKFDADG YLAKGTFASR LPADIQKAIR KHGIRNSHLL SIAPTGTVSL AFADNASNGI
EPPFSWSYTR RKREADGSKS EYVVEDYAWR LYKTLGGDVN HLPAYFVSAM DMAAADHVAM
MEAVQPFVDT AISKTVNVPE DYPYADFKGL YMQAWHSGLK GLATYRPNSI LGAVLEVTPA
AAPAPAAAPE AVPAPVVVDP MRTMIESRPT GGLSAVAEKL EYWTQEGHKT LYLIVSFLPV
PDGRGGTVDR AIEFFMPVGQ SGESQQWITS SMRLLSLAAR GGFLERALSD MRKVAWDRGP
VRLGTHQKAD GTHVPLWHDS EVAAIAYAVQ NILAQRAMPQ QQVLPLDEPA AAPATGMPPA
MAGKKCNECG AHAVIRKDGC DYCTQCGALG SCG
|
|---|
| |