Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0420 |
Symbol | |
ID | 7384007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 425450 |
End bp | 427822 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643653735 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_002551904 |
Protein GI | 222109640 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.252746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCGAT TGTCGCAGCA CGCGAGGCCC CTTCAGGAGT GTGGATTGCT GAGTAAAGGC GCGGGCCGCA GGCCCTCGTG GAGGCCCCTG CAGGGCCGCT GGATGTTGGC GCTGGCCGTT GGTGCCATGG GTGCGGCCTG GGCCTGGGCG GGTGCGGCCG CCTTGCAGTA TCTGCCCCTG GAGCCGCAGG CGCTGCAGAC CCTGCTGCAG TACAAGAGCG GGCTGGACGC CGTGCTGGCG GGCGCACTGC TGGGCTGGCT CCTGCTGCGC TGGCGCCGGG GCGGGAGCCG GCGCACCCTG GCGCGCCGGG TGGAGCAGGT GCTGCGCCAC GCGCCCGCCG GCATGGCGCG GCTGAGCATG GACGGCCGCC TGGTATGGGC CAACGAACGC CTGCGTGAAT GGCTGGGCGT GGCGCCGCAC GAGCCGCTAC CCCAGGTCGA CTTTCGCACG CTGGTGCGCC CGCACGACAG CGATTGGGCG CAGCGGCAAC TGCAGCGGCT GCGCGCCGGC GAGATCGACC ATTACCAGGG CGAGCGCTGG TGCCGCAACC AGCGCGATGG ATCGCAGCTG CCCGTGCTGT GCACCGTGAG CCATGTGCTG GCCCTGGAGA GTGAGCCCGA CCACCTGGTG TGCGTACTGC AGTCCCTGCG CGAAGTGCAT GCCGCGCGCG ACGCGCAGGC GCTCAGCGAG CAGCGCTGGC GCCTGGCGGC CACGGTGGTG GACAACACCA TCGAAGGCGT GGTGGTCACC GATGCCGACG GCCGCATCCT CTCGGTCAAC CCGGCCGTCA CGCGGCTCAT GGGCTATACC GAGGAAGAGT TGCTGGGCCA GAACCCGCGT GTGTTCAAGT CGGGGCGGCA CGGACCGGCG TTCTACGAGG CCATGTGGGA CACCATGCGC CAGACGGGCC ACTGGCAGGG GGAGATCTGG AACCGGCGCA AGAACGGCGA GGTGTTCCCG GAGCGCATGT CGCTCTCGGC CGTGCGCGGC GCGGACGGCG CGGTGACGCA CTACGTGTGC ATGTTCACCG ACATCTCCGA GGAAAAGGCC CAGCACCAGC GCCTGGAGTT TCTGGCGCAC TGCGACCCGC TGACCGGCCT GCCCAATCGC GCCTGGTTCG GCGAGCAGCT CGACAGCGCC GTGCGCCAGG CCCAGGACAG CGGCGAGCAG ATGGCCCTGC TGCTCCTGAA CCTGGACCGC TTCAAGGACG TGAACGACAG CTACGGCCAC GCCGTGGGCG ACGAGGTGCT CAGGCACATC ACCCGCCAGG TGGAGCAGAG TCTGCGCCCG GGCGATCTGC TGGGGCGGCT GGCCGGCGAC GAGATCGCCG TGCTGGCCCG CCACCTGCGC CATGCGGACG GCGCGGCAGC CGTGGCGCGG CACCTGATCG CCGCGGCCAG CACGCCCTGG TGCACGCCCG ATGGCATCCA GGTGGTGGTG GGCGTGAGCG TGGGCATCTG CATGTTCCCC GCGCATGCGC GGACCACCGA GGCGCTGCTG CAGGGCGCGC ATTCCTCGGT GTACGGCGCC AAGGCCCGCG GGCGCGGCGC GTATTGCTTC TTTGACGAAT CGCTCATTCA GGCCGCGCGC GAGCGCCTGG AGATCGAGGC GCGGCTGCGC GTGGCCCTGG CGCAGGGGCA CCTGCGGCTG TACTACCAAC CGCAGGTATG CATCGTCACC GGCCGGATCA TGGGGGCCGA GGCGCTGGTG CGCTGGCTGG ACCCGCAGGA GGGCATGATC TCGCCCGCCC GCTTCATCCC CGTGGCCGAG ACCTCGGGCG TGATCGGCCC GCTGGGCCAG TGGGTGATGC GCGCCGCCTG CGAGCAGGGC CAGCGCTGGC GCGCCGACGG CCTGCCGGAG ATCCGCCTGG CCATCAATCT CTCGCCGCGC CAGTTCCAGT TGACCGACGT GGCCGCCTGC GCCGCCGAGG CGCTCAAGGC CAGCGGCTTC CCGGCCCGCT GCCTGGAGCT GGAACTGACC GAGTCGGTGC TGGCCGAGCG GCCCGACGAG ATCCGCGCCG TGCTGCAACG CCTGCAGCAG CTGGGCGTGC GCATGGCGGT GGACGACTTC GGCACCGGCT ATTCGTCCCT GGCGCACCTC AAGCGCTTTC CCATCGACGT GCTCAAGATC GACCAAGGCT TCATCCGCGA TATTCCCCGC AGCGCCGACG ACATGGCCAT CAGCGCCGCC ATCGTTGCCA TGGGGCACAG CCTGGGGCTG TCGGTGCTGG CCGAGGGGGT GGAGACGCCG CAGCAGCTGG CGTTCCTGCG CGAGCGCGGC TGCGACGCCT ACCAGGGCTA CCTGTGCAGC CGCCCCCTGC CGGCGGAGGA GTTCGCCCGG CTGCTGCAGG CGCACAACGG CATGGCGGGC TGA
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Protein sequence | MLRLSQHARP LQECGLLSKG AGRRPSWRPL QGRWMLALAV GAMGAAWAWA GAAALQYLPL EPQALQTLLQ YKSGLDAVLA GALLGWLLLR WRRGGSRRTL ARRVEQVLRH APAGMARLSM DGRLVWANER LREWLGVAPH EPLPQVDFRT LVRPHDSDWA QRQLQRLRAG EIDHYQGERW CRNQRDGSQL PVLCTVSHVL ALESEPDHLV CVLQSLREVH AARDAQALSE QRWRLAATVV DNTIEGVVVT DADGRILSVN PAVTRLMGYT EEELLGQNPR VFKSGRHGPA FYEAMWDTMR QTGHWQGEIW NRRKNGEVFP ERMSLSAVRG ADGAVTHYVC MFTDISEEKA QHQRLEFLAH CDPLTGLPNR AWFGEQLDSA VRQAQDSGEQ MALLLLNLDR FKDVNDSYGH AVGDEVLRHI TRQVEQSLRP GDLLGRLAGD EIAVLARHLR HADGAAAVAR HLIAAASTPW CTPDGIQVVV GVSVGICMFP AHARTTEALL QGAHSSVYGA KARGRGAYCF FDESLIQAAR ERLEIEARLR VALAQGHLRL YYQPQVCIVT GRIMGAEALV RWLDPQEGMI SPARFIPVAE TSGVIGPLGQ WVMRAACEQG QRWRADGLPE IRLAINLSPR QFQLTDVAAC AAEALKASGF PARCLELELT ESVLAERPDE IRAVLQRLQQ LGVRMAVDDF GTGYSSLAHL KRFPIDVLKI DQGFIRDIPR SADDMAISAA IVAMGHSLGL SVLAEGVETP QQLAFLRERG CDAYQGYLCS RPLPAEEFAR LLQAHNGMAG
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