| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0412 |
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| Symbol | |
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| ID | 7383999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 416988 |
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| End bp | 418031 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643653727 |
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| Product | twitching motility protein |
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| Protein accession | YP_002551896 |
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| Protein GI | 222109632 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACATCA CCCAATTGCT CGCCTTCAGC GTGAAGAACA AGGCGTCCGA CCTGCACCTT
TCCGCCGGCC TGCCGCCCAT GATCCGGGTC CACGGGGACG TACGCCGCAT CAACGTCGAT
GCACTGGACC ACAAGACCGT CCACGCCATG GTGTACGACA TCATGAGCGA CGCCCAGCGC
AAGACCTACG AAGAGTTCCT GGAAGTGGAC TTTTCCTTCG AGATCGACGG CCTGGCGCGC
TTTCGCGTCA ACGCGTTCAA CCAGAACCGC GGCGCGGCCG CGGTGTTCCG TACCATTCCG
AGCAAGATCC TGACGCTGGA GCAGCTCAAC GCGCCCAAGA TTTTTGCCGA CCTGGCGCTC
AAGCCGCGCG GCCTGGTGCT GGTGACGGGC CCCACAGGCT CGGGCAAGTC CACCACCCTG
GCGGCCATGG TCAACTACCT CAACGAAAGC GAGTACGGCC ACATCCTCAC GGTGGAAGAC
CCGATCGAGT TCGTGCACGA GTCCAAGAAG TGCCTGATCA ACCAGCGTGA AGTCGGCCCG
ATGACGCTGT CGTTCGCGGC CGCGCTGAAG TCCGCCCTGC GCGAAGACCC GGACGCCATC
CTGGTGGGCG AAATGCGCGA CTTGGAAACC ATCCGCCTGG CCATGACCGC CGCGGAAACG
GGCCACTTGG TGTTCGGCAC GCTGCACACG TCCAGCGCCG CCAAGACCAT CGACCGGATC
ATCGACGTCT TCCCCGCCGA AGAAAAGGAA ATGGTGCGCG CGATGTTGTC GGAGTCGCTG
CAGGCGGTGA TCTCGCAGAC GCTGTGCAAG ACCAAGGACG GTTCTGGCCG CGTGGCGGCG
CACGAGATCA TGCTGGGCAC GAGCGCCATC CGCAACCTGA TCCGCGAGGC CAAGGTGGCG
CAGATGTACT CCACCATCCA GACCAGCAAC AGCGTGGGCA TGCAGACGCT GGACCAGAAC
CTCTCCGACC TGGTGCGCCG CAACATCATC AGCCCGGCCG AGGCGCGCAG CAAGGCCAAG
ATTCCCGAGA ACTTCCCCGG CTGA
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| Protein sequence | MDITQLLAFS VKNKASDLHL SAGLPPMIRV HGDVRRINVD ALDHKTVHAM VYDIMSDAQR
KTYEEFLEVD FSFEIDGLAR FRVNAFNQNR GAAAVFRTIP SKILTLEQLN APKIFADLAL
KPRGLVLVTG PTGSGKSTTL AAMVNYLNES EYGHILTVED PIEFVHESKK CLINQREVGP
MTLSFAAALK SALREDPDAI LVGEMRDLET IRLAMTAAET GHLVFGTLHT SSAAKTIDRI
IDVFPAEEKE MVRAMLSESL QAVISQTLCK TKDGSGRVAA HEIMLGTSAI RNLIREAKVA
QMYSTIQTSN SVGMQTLDQN LSDLVRRNII SPAEARSKAK IPENFPG
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