| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0410 |
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| Symbol | |
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| ID | 7383997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 415099 |
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| End bp | 416235 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643653725 |
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| Product | twitching motility protein |
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| Protein accession | YP_002551894 |
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| Protein GI | 222109630 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGGG ATCAGGCGAG TAAATTCATC AACGATCTGC TCAAGCTGAT GGTCAGCCGC
GGGGGGAGCG ACCTTTTCAT CACGGCGGAG TTTCCGCCGG CGATCAAGGT CGACGGCAAG
GTCACCAAGG TCTCTCCCCA GCCTCTGACG CCCAACCATA CGCTCACGCT GGCGCGCGCC
ATCATGAGCG ACAAGCAGGT GGCCGACTTC GAGCGCACCA AGGAGTGCAA CTTTGCCATC
TCGCCCGCGG GCGTGGGCCG GTTCCGCGTG AACGCCTTCG TGCAGCAGGG CCGCGTGGGC
ATGGTGCTGC GGACGATTCC GCTCACGCTG CCCACCATCG ACGGCCTGGG CGTTCCGCAG
GTGCTCAAGG AAGTCACCAT GACCAAGCGC GGACTGTGCA TCCTGGTCGG CGCGACGGGC
TCGGGCAAGT CCACCACGCT GGCCGCCATG CTGGACTGGC GCAACGAGAA CTCCTTCGGC
CACATCATCA CGGTGGAAGA CCCGGTGGAA TTCGTGCATC CGCACAAGAA CTGCGTGATC
ACGCAGCGCG AGGTGGGCCT GGACACCGAC AGCTGGGAGG CGGCCCTCAA AAACACCCTG
CGTCAGGCGC CGGACGTGAT CCTGATGGGC GAAATCCGCG ACCGCGAGAC CATGGAGCAC
GCCGTGGCGT TTGCCGAAAC CGGCCACCTG TGCCTGGCCA CGCTGCACGC CAACAGCGCC
AACCAGGCGC TGGACCGGAT CATCAACTTC TTCCCCGAGG AGCGGCGCGC CCAGTTGCTG
ATGGACCTGT CGCTGAACCT CAAGGCACTG ATCTCGCAGC GCCTGATTCC CAAGCAGGAC
GGCAAGGGGC GCGCGGCCGC CGTCGAGGTG ATGCTGAACA CGCCGCTGAT CGCCGACCTC
ATCTTCAAGG GCGAGGTGGC CGAGATCAAG GAAATCATGA AGAAGAGCCG CAACCTGGGC
ATGCAGACCT TCGACCAGGC ACTGTTCGAC CTGTTCGAGG CCAACGTGAT CAGCTATGAG
GATGCCCTGC GCAACGCCGA CTCGGTGAAC GACCTGCGCC TGCAGATCAA GCTCAGCAGC
CAGCGTGCCA AGACGACGGA CCTGGCCTCG GGCACCGAGC ATTTCGCCAT CGTCTGA
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| Protein sequence | MERDQASKFI NDLLKLMVSR GGSDLFITAE FPPAIKVDGK VTKVSPQPLT PNHTLTLARA
IMSDKQVADF ERTKECNFAI SPAGVGRFRV NAFVQQGRVG MVLRTIPLTL PTIDGLGVPQ
VLKEVTMTKR GLCILVGATG SGKSTTLAAM LDWRNENSFG HIITVEDPVE FVHPHKNCVI
TQREVGLDTD SWEAALKNTL RQAPDVILMG EIRDRETMEH AVAFAETGHL CLATLHANSA
NQALDRIINF FPEERRAQLL MDLSLNLKAL ISQRLIPKQD GKGRAAAVEV MLNTPLIADL
IFKGEVAEIK EIMKKSRNLG MQTFDQALFD LFEANVISYE DALRNADSVN DLRLQIKLSS
QRAKTTDLAS GTEHFAIV
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