Gene Dtpsy_0408 details

Gene Information

• Locus tag: Dtpsy_0408
• ID: 7383995
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 413334
• End bp: 414008
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643653723
• Product: transport-associated
• Protein accession: YP_002551892
• Protein GI: 222109628
• COG category: [R] General function prediction only
• COG ID: [COG2823] Predicted periplasmic or secreted lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACATTTC CCCTGCTGCG AATTTCTAGC GCCGCGCTCG CGGCCGCGGC CCTGGCCGGC 
AGCCTCGCCG GCTGCGCGCC GCTGGTCATC GGCGGCGGTG CCGTGGTCGG CACCCTGATG 
GCGACCGACC GGCGCACCAC CGGCACCCAG GTGGAGGACG AAGGCATCGA GATGCGCACC 
GCCAGCCGCA TCCGTGAGAC CCTGGGCGAC CGCGTGCACG TGAACGTGAC CAGCTACAAC 
CGCCAGGTGC TGCTGACGGG CGAAGTGCCC ACGGCCGCCG ACGGCCAGAA GGTGGAGCAG 
ATCGCGCAAG GCGTGGACAA CGTGCGCTCG GTGGTCAACG ACCTGGGCGT GATGCCCGCG 
TCCTCGCTGA CGCAGCGCTC GCGCGACGCC TTCATCTCGA CCAAGGTGCG CGCGAGCCTC 
GTGGACGCCA AGGACCTGTC TGCCAATGCG TTCAAGGTCG TCACCGAGCG CGACGTGGTG 
TACCTGATGG GCCGTGTCAC GCAGCGCGAA GCCAAGCGCT CCGCGGAGAT CGCGCGCGGC 
GTGGATGGCG TACGCAAGGT CGTGCGCGTG TTCGAGGTGA TCTCCGAAGA GGAACTGATC 
CGCGGTGGCG CGGCGCAGCA GCCCGCGCCC GTCTCGCAGG ACCCCGCCGC GGCGGCGCAG 
CCAGTCAAGC CCTGA 

 

Protein sequence

MTFPLLRISS AALAAAALAG SLAGCAPLVI GGGAVVGTLM ATDRRTTGTQ VEDEGIEMRT 
ASRIRETLGD RVHVNVTSYN RQVLLTGEVP TAADGQKVEQ IAQGVDNVRS VVNDLGVMPA 
SSLTQRSRDA FISTKVRASL VDAKDLSANA FKVVTERDVV YLMGRVTQRE AKRSAEIARG 
VDGVRKVVRV FEVISEEELI RGGAAQQPAP VSQDPAAAAQ PVKP