| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0402 |
|---|
| Symbol | |
|---|
| ID | 7383989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 407553 |
|---|
| End bp | 409070 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643653717 |
|---|
| Product | glycosyltransferase |
|---|
| Protein accession | YP_002551886 |
|---|
| Protein GI | 222109622 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCT CCACCGCGCC CCGCGCGCTT TCGTCCCGCC TTCCCTGGAC CCACCCGCTG
TTCTGGTTCG CGGCCATCTC GCTGGCGCAC GTGGCCATGC GCCTGCTCGC TTCGCCCGCG
CTGAAGTGGG ATGAGGCCGA GCAGATTCTG TGGACCCAGG AGCTGGCACT GGGCTACGGC
CCGCAGCCGC CGCTGTACAC CTGGCTGCAA TGGGCGATGA ACCAGGTGTT CGGCCCCAGC
GTGCTGGCAC TGTCGCTGCT CAAGCATGGG CTGCTGGCAC TGACGTATTC GCTCATGTAC
CTGGCCGGGC GGGAACTGCT GGACGAGCGG GGGGCCTTCT GGGCGTCGGC CAGCATGGTG
CTGATGCCCG CGCTGGGCTG GTATTCGGTC CGCGACCAGA CCCATACCAT CCTCGTCACG
GCGATGGCCT GTGGCGCGTG GTGGCTGCTG CTGCGCATCG TGCGGCGCCC CCGGCCGCTG
GACTTTGCCT TGCTGGGGCT GGTGTGCGGC TTCGGCATGC TGGGCAAGTA CAGCTTCGCG
CTGGTGGCGG GCGCCATGCT GCTGGCGGCG CTGTCGGTAC CCGAGGCGCG CCGCGCGCTG
CTGTCGCGCG GCTGGTGGTG GGCGCCCCTG GTGGGCCTGC TGGTCGTGCT GCCGCATGCG
GCATGGCTGC TGTCACACCT CACCGAGGCG ACGTCCGGCA CCATCAGCAA GATGAACATC
CAGCCTGAAA ACGGGCTGGT CAAGGGCCTG CTGAGGCTGC TGGAGGGTGT GGTCCCCAGC
ACGCTGCTGC TGTGGGCGCT GTTCGCGTTG TGGGCTTTCC GTTCGGCCTG GTGGCAGCGG
CCGCTGGCGC CGGTGTCTCC GCCGATGCAC CGCGTGTTCG TGCGCTACCT GGGCCTGGTG
TTGCTGGCGC TGGCCGGCAT GGTGGTGTTT GCAGGCGTGA GCAACTTCAA GGGCCGCTGG
ATACTTCCAC TGCTGTGTAT GGCACCCCTG GCCGCCTTCT CTGCGCGGCC CGAATTGCAA
CACCACCCGC GTGCACGGCG CTACACGATC GCCGTGGCCA CGATGGCCGT CATCCTGCTG
GTCGCTGCCG GCATACGCCC CTGGTTCAGC GGGCTGCGCG GCGAGGTGGA TGAGCTGAAC
CACCCGTCCA TCGAACTGGC GGACGCCCTG CGCGCCGCGG GCTATGACGG CACCAGCCCC
ATCGTCGCGT CCGACCATAT GCTGGCCGGC ATGCTGCGGG TGCGCTTTCC CGACGCGTTG
GTGGACGCCT GTGCGCCGGG CGAAGACGAG ATCCCGACCT GTGTCGCCGA CCATTTGCGC
CGCAGCGAGC AGCGGGGGCA AGGCCTGCTG TTGATTTCAC GCACCGACTA CGTTCCGTCG
AGCTGGTGGG ATCAGGCCCA GGCCCGCATC GCGCCGCGTG CGCTGCAGTC CATCCACCTG
CCATTCCATA TGGTGCGCGC GGGCACACCC CAGGCCCATT ACGAATACAT CTGGAGCCCA
CGCGGCACAC AACCATGA
|
|---|
| Protein sequence | MTASTAPRAL SSRLPWTHPL FWFAAISLAH VAMRLLASPA LKWDEAEQIL WTQELALGYG
PQPPLYTWLQ WAMNQVFGPS VLALSLLKHG LLALTYSLMY LAGRELLDER GAFWASASMV
LMPALGWYSV RDQTHTILVT AMACGAWWLL LRIVRRPRPL DFALLGLVCG FGMLGKYSFA
LVAGAMLLAA LSVPEARRAL LSRGWWWAPL VGLLVVLPHA AWLLSHLTEA TSGTISKMNI
QPENGLVKGL LRLLEGVVPS TLLLWALFAL WAFRSAWWQR PLAPVSPPMH RVFVRYLGLV
LLALAGMVVF AGVSNFKGRW ILPLLCMAPL AAFSARPELQ HHPRARRYTI AVATMAVILL
VAAGIRPWFS GLRGEVDELN HPSIELADAL RAAGYDGTSP IVASDHMLAG MLRVRFPDAL
VDACAPGEDE IPTCVADHLR RSEQRGQGLL LISRTDYVPS SWWDQAQARI APRALQSIHL
PFHMVRAGTP QAHYEYIWSP RGTQP
|
|---|
| |