| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0395 |
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| Symbol | rpsM |
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| ID | 7385403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 401876 |
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| End bp | 402241 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643653709 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_002551879 |
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| Protein GI | 222109615 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.280669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACGTA TTGCTGGTAT CAATATCCCG CCCCATCAGC ACACCGAGAT TGGCCTGACG
GCCATCTACG GGATCGGGCG TACCCGTGCT CGCAAGATTT GCGAGGCATG CGGAATTGCT
TATTCCAAGA AGGTCAAGGA ATTGACCGAT GCCGATCTGG AGAAGATTCG CGACCAGATC
GCTCAGTTCA CCATCGAAGG TGACCTGCGC CGTGAGACCA CGATGAACAT CAAGCGACTG
ATGGACATTG GTTGCTATCG CGGTTTCCGT CATCGTCGCG GTCTGCCGAT GCGTGGTCAG
CGCACGCGCA CCAACGCACG CACCCGCAAG GGCCCGCGCA AGGGTGCAGC GGCACTGAAG
AAGTAA
|
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| Protein sequence | MARIAGINIP PHQHTEIGLT AIYGIGRTRA RKICEACGIA YSKKVKELTD ADLEKIRDQI
AQFTIEGDLR RETTMNIKRL MDIGCYRGFR HRRGLPMRGQ RTRTNARTRK GPRKGAAALK
K
|
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