Gene Dtpsy_0392 details

Gene Information

• Locus tag: Dtpsy_0392
• Symbol: rplO
• ID: 7385400
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 399820
• End bp: 400251
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643653706
• Product: 50S ribosomal protein L15
• Protein accession: YP_002551876
• Protein GI: 222109612
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.0068073
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACTCA ATAGCATCAA GCCCGCAGAT GGTGCCAAGC ACGCCGCGCG CCGCGTTGGT 
CGCGGCATTG GTTCCGGCCT GGGCAAGACC GCTGGCCGTG GCCACAAGGG ACAAAAGTCC 
CGCTCCGGGG GGTACCACAA GGTGGGCTTC GAAGGCGGTC AAATGCCTTT GCAGCGCCGT 
CTGCCCAAGC GCGGCTTCAA GTCGCACCTG CTGAAGTTCA ATGCGGAAAT CTCCTTGACC 
GCCCTGGAAA ACCTGGGGTT GGCTGAGGTG GATGTGCTGG CGTTGAAGAA CGCAGGATTG 
GTTGGCGAGC TGGCCAAGGT GGTCAAGGTG ATCAAGAGTG GCGAGATTTC CAAGGCTGTG 
AAGCTGTCGG GAATCACCGC AACTGCTGGC GCCAAGGCTG CCATCGAAGC GGCCGGCGGT 
AGCCTGGCCT GA 

 

Protein sequence

MELNSIKPAD GAKHAARRVG RGIGSGLGKT AGRGHKGQKS RSGGYHKVGF EGGQMPLQRR 
LPKRGFKSHL LKFNAEISLT ALENLGLAEV DVLALKNAGL VGELAKVVKV IKSGEISKAV 
KLSGITATAG AKAAIEAAGG SLA