Gene Dtpsy_0390 details

Gene Information

• Locus tag: Dtpsy_0390
• Symbol: rpsE
• ID: 7385398
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 399091
• End bp: 399612
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643653704
• Product: 30S ribosomal protein S5
• Protein accession: YP_002551874
• Protein GI: 222109610
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00152796
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAAAT TTCAACCCAA GGTACAGAGC GAAGGTCAGG ACGACGGTCT GCGCGAAAAA 
ATGATCGCGG TCAACCGCGT GACCAAAGTC GTGAAGGGTG GCCGCATTCT GGGCTTCGCT 
GCGCTGACGG TGGTTGGCGA TGGTGACGGC CGCGTGGGCA TGGGCAAGGG TAAGTCCAAG 
GAAGTGCCCG CCGCCGTGCA AAAGGCCATG GAAGAGGCAC GTCGCAACAT GGTGAAGGTG 
TCGCTGAAGA ACGGCACCAT TCACCACAAC GTGACGGGCC ACCACGGCGC AGCCGTGGTG 
ATGATGGCCC CGGCCCCCAA GGGTACCGGC ATCATCGCTG GCGGCCCGAT GCGCGCCGTG 
TTCGAGGTGA TGGGCATTAC CGATATCGTG GCCAAGAGCC ACGGTTCGTC CAACCCTTAC 
AACATGGTTC GCGCCACGTT TGACGCCCTG ACCAATTCCA CTACGCCGGC CGAAGTGGCC 
GCTAAGCGCG GTAAGACGGT CGAAGACCTC TTCGCTGCCT GA 

 

Protein sequence

MAKFQPKVQS EGQDDGLREK MIAVNRVTKV VKGGRILGFA ALTVVGDGDG RVGMGKGKSK 
EVPAAVQKAM EEARRNMVKV SLKNGTIHHN VTGHHGAAVV MMAPAPKGTG IIAGGPMRAV 
FEVMGITDIV AKSHGSSNPY NMVRATFDAL TNSTTPAEVA AKRGKTVEDL FAA