| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0389 |
|---|
| Symbol | rplR |
|---|
| ID | 7385397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 398708 |
|---|
| End bp | 399073 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643653703 |
|---|
| Product | 50S ribosomal protein L18 |
|---|
| Protein accession | YP_002551873 |
|---|
| Protein GI | 222109609 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0256] Ribosomal protein L18 |
|---|
| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000189964 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACCA AAAAAGAGCA GCGTCTTCGT CGTGCCCGCC AGACCCGCAT CCGCATTGCC
CAGCAAGGTG TCGCGCGTCT GACGGTCAAT CGTACGAATC TCCATATCTA CGCCAGTGTG
ATCTCCGGCG ATGGCAGCAA GGTGCTGGCC AGCGCATCCA CGGCCGAAGC CGATGTGCGC
AAGTCGCTCG GTGGCTCGGG CAAGGGTGGC AACGCCGCTG CAGCCCAGAT CATCGGCAAG
CGCATCGCCG AGAAGGCGAA GGCGGCCGGT GTCGAGAAGG TTGCATTTGA TCGTGCAGGT
TTTGCATACC ACGGCCGCGT GAAGGCCCTG GCCGATGCAG CCCGTGAAGC CGGCCTGCAG
TTCTAA
|
|---|
| Protein sequence | MLTKKEQRLR RARQTRIRIA QQGVARLTVN RTNLHIYASV ISGDGSKVLA SASTAEADVR
KSLGGSGKGG NAAAAQIIGK RIAEKAKAAG VEKVAFDRAG FAYHGRVKAL ADAAREAGLQ
F
|
|---|
| |