| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0362 |
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| Symbol | |
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| ID | 7385370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 371180 |
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| End bp | 373852 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643653676 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002551846 |
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| Protein GI | 222109582 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.190279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCGAGA GACCGGATAC GCAGGCCGAG CGTTTTCGCA GGGAGTGGTG GTTGCTGGCG
GGCCTGTGGC TGGCGCTGGG GGCGCTGATC GCGGTCGTGC TGAGCCTGGA GCGGCGCGAC
ACCGAGGAAC GCGAGCGCCA GCAGGTCGCG CACCAGGTGC ATATCGTCCA TGAGAACCTG
GAGCGCCAAC TGCATGCCGT GAACCAGGCG CTGGGGGATA TTGTTGCGAA CCTGGCGCAG
TGGCGCGCGC GCCCTGAAGG CGCCTTGCCA TTCAACGAGC GGCTGCGGGC CTTCAGCGAC
GCCATGACCG GCGTGCGCAC GCTGACCGTG CTGGATGCCG AGGGTACGGT GGTCGCCTCC
AGCCGCGCCG AACTGCTCGG GGAGAACTTT GCCTACCGCG ATTACTTTCA GTCGGCGCGC
CGGCTGGCAA GCCGCGAGCA GCCCTCGCTG ATCGTCAGCG CGCCCATGCG CACGGTGTTG
GGTATCTGGG CCATCACGTT GTCGCGCCCC GTGCCAGCGG AGGATGGGCT GCCCGGCGGC
GTGGTCACGG CGACGCTGGA CCCCGACGAG TTCAAGACCT TGCTGGATTC CGTGCGCTAC
GCCCCCGACG TGGAGAGCAC CCTGGTGCAC GGCGACGGCG TGCGCTTCCT GCGCGTGCCC
GAACGGGCGG GGCTGCTGGG CGCCACGCTG GCGCAGCCCG GCACGCTCTT TCAGGCGCAC
CTGGATAGCG GGCGGATGGA AAGCCTCTTC GTCGGCGCGA TGGAGCCGGA CCCGGCCGAG
CGGCTGGTGG CGCTGCGCAC CATCTTTCCG GCGCACCTGC ACATGGACAA GCCGTTGGTT
GCGGCCGTCG CGCGGGACTG GAGCCAGGTG TTCGCCGCCT GGCGCGCGCG CGCCTGGACG
CTGGGTGTGG CATGGCTGCT GACGGGGGTT GCCATTGGGC TGGGCCTGGG CTTCATGCAG
CGCCGGCGCC GCCAGCTGTG GCGCCGCGAG CAGGCGCTGG CCGCCCAGGA GGCCGCGCTG
CAGGCCCGCT GGCAGGCGGT GCTGCACGCC ACCCAGCAGG GCGTGTGGGA CTGGGACATG
GCCGCGGGCA CGGTGTATTT CTCGCCGGTA TGGAAGACCA TGCTCGGCTA CGCAGAAGGC
GACATCGGCG ACAGCCTGCA GGAATGGGAA AGCCGCGTGC ATCCCGACGA TCTGGCGCGC
GTGCACGCCG ACGTGGCGCG CCACCTGGCG GGTGAAACGG TGGTCTATGA AAACGTGCAC
CGCATGCGCT GCAAGGACGG CAGCTACAAA TGGGTGCAGG ACCGCGGCCA GGTGACCTCG
CGCGACGCCA GCGGCCGACC CACCCGCCTC ATCGGCACCC ACACGGACGT GACCGCGCAG
CGCCAGCACC AAGAGACGCT GGACCGCCTG GCCGAGAACG TGCCCGGCGC GCTGTACCAG
TACCAGCGCG AACCCGACGG GCGCAGCCAC TTCCCGTACG CCAGCCCCGG GGTGCAGGAC
ATCTACGGGC TTCCCCCGCA GGCCCTGTGC GTGGACGCGG AGCAGGTCTT CGCGCGCATC
CACCCCGACG ACCTGCAGGC GCTGCGCGAG AGCGTGCTGG CATCCGCGCA GACCCTGGAG
CTGTGGCGCA CCGAATACCG TGTGCTCGTG CCGGGCGAGC GCGAGCGCTG GGTCAGCGAC
CAGGCGCGGC CCGCGCGCAC GGCCTCGGGT GCCGTGCTGT GGCATGGCTA TATCCATGAC
GTGACGCTGG CCAAGCAGCA GGCGCTGCAG CTGCAGGAGA CCGAGCGCCT GCTCAGGCAT
CTGATGCAGG AAATGCCCAT CGGGCTGTGC ATGATCGATG CCGCGGGCGT GATCTACTTT
CGCAACCGGC GCTTCATGGA CCTGTTCGGC TACACCGAGG CCGAGGTGCC CACGCTGGGG
CAGTGGTGGC CGCGGGCCTA TCCCGATCCG CACTACCGCG AACAGGTCAT CGCCGCGTGG
AACGCAGACC TGGCGCAGGC AGGCGCGCAG GGGGGCGAGA TCGCGGACAG GGAATACCGC
GTCACCGACC GCGACGGCAG GCTGCATACG ATGACCATCG GCGGGCTGGC TTTTGGCGAC
CATTGCATGG CCACCTTCGT GGACGTGACC GAGCAGCGCG CGCAACATGA ACTGCTGCGC
AAGCTCGCCT TCATGGACGG GCTGACGGGC CTGGCGAATC GCCGCCAGTT GGACCGCACC
CTCAAGGCCG AATGGCGGCG CTGCCGGCGC AGCGGCCAGC CCCTGTCCGT GGTGATGGTG
GACATCGACC ATTTCAAGCA GTTCAACGAC CTGTATGGCC ACCAGCAGGG CGACGATTGC
CTGCGCGCCG TGGCCGCCGC GCTGCGCGGC GGCCTGGGGC GGTCGCACGA CCTCGTGGCC
CGCTACGGCG GTGAAGAGTT CGTCTGCCTG CTGCCCGAGT GCGACCTGGA CGGCGCGCGC
GCCAAGGCGC AGGCGCTGTG CCGGGCCGTG CATGCGCGGC AGATGGAACA CCGCGGCTCG
CCGATTGCGC CCGTGGTCAC GGTGAGTGCC GGGGTGGCCT GTGTGGTGCC CGGCGCCGAA
GACACCCCCG AACAGTTGCT GGCGCGCGCG GATGCGAACC TGTACCGCGC CAAGGCGGCA
GGCCGCAACC GGGTGCATGA TGGAATGGAT TAG
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| Protein sequence | MRERPDTQAE RFRREWWLLA GLWLALGALI AVVLSLERRD TEERERQQVA HQVHIVHENL
ERQLHAVNQA LGDIVANLAQ WRARPEGALP FNERLRAFSD AMTGVRTLTV LDAEGTVVAS
SRAELLGENF AYRDYFQSAR RLASREQPSL IVSAPMRTVL GIWAITLSRP VPAEDGLPGG
VVTATLDPDE FKTLLDSVRY APDVESTLVH GDGVRFLRVP ERAGLLGATL AQPGTLFQAH
LDSGRMESLF VGAMEPDPAE RLVALRTIFP AHLHMDKPLV AAVARDWSQV FAAWRARAWT
LGVAWLLTGV AIGLGLGFMQ RRRRQLWRRE QALAAQEAAL QARWQAVLHA TQQGVWDWDM
AAGTVYFSPV WKTMLGYAEG DIGDSLQEWE SRVHPDDLAR VHADVARHLA GETVVYENVH
RMRCKDGSYK WVQDRGQVTS RDASGRPTRL IGTHTDVTAQ RQHQETLDRL AENVPGALYQ
YQREPDGRSH FPYASPGVQD IYGLPPQALC VDAEQVFARI HPDDLQALRE SVLASAQTLE
LWRTEYRVLV PGERERWVSD QARPARTASG AVLWHGYIHD VTLAKQQALQ LQETERLLRH
LMQEMPIGLC MIDAAGVIYF RNRRFMDLFG YTEAEVPTLG QWWPRAYPDP HYREQVIAAW
NADLAQAGAQ GGEIADREYR VTDRDGRLHT MTIGGLAFGD HCMATFVDVT EQRAQHELLR
KLAFMDGLTG LANRRQLDRT LKAEWRRCRR SGQPLSVVMV DIDHFKQFND LYGHQQGDDC
LRAVAAALRG GLGRSHDLVA RYGGEEFVCL LPECDLDGAR AKAQALCRAV HARQMEHRGS
PIAPVVTVSA GVACVVPGAE DTPEQLLARA DANLYRAKAA GRNRVHDGMD
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