| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0335 |
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| Symbol | |
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| ID | 7385343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 344532 |
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| End bp | 345215 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643653649 |
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| Product | lipopolysaccharide transport periplasmic protein LptA |
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| Protein accession | YP_002551819 |
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| Protein GI | 222109555 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.109601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCAA GATTCGTGCC CTCTATGAGA ACCCGATTGC CCTTCCTCCT CCTGTCCCGC
GCCGCAGCGC TGGCCCTGGC GCTGGCCGCA TCGCCGCTGG TGCACGCCGA AAAAGCCGAC
CGCAACAAGC CCATGAACAT CGAGGCCGAT GCCCTGCGCC ACGATGAGCT CAAGCAGACC
AGCGTTTTCA CCGGCCGTGT CGTCATGACC AAGGGCACCA TCGTGCTGCG CGGCGCGCAG
CTGGAGGTGC GCCAGGATGC CGACGGCTTC CAGTACGGTG TGGTGACGGC CGAGCCGGGC
AAGCGCGCTT TTTTCCGGCA AAAACGTGAC ACCGCGCCGG GCGCGCCCGA CGAGTTCGTC
GAGGGCGAGG GCGAGGTCAT CGAATACGAT GGCCGCGCCG ACGTGGTGAA GCTCATCCGC
CGCGCCGAGC TGCGCCGCTA CCGCGAGGCC ACACTGACCG ACGAGCTGGC CGGCGCCCTC
ATCGTCTACA ACAACCTCAC GGACGTGTTC ACCGTGGACG GGCAGAAGAC CGCGCCCGCC
GGCGCCACTG CCGGCACGCC GGGCGGCCGG GTGCGGGCGG TGCTCGCGCC CAAGGAGCCT
GCCTCGGGCA CCAGCGCCAC GCCGCCCGTG CGCACCGAGC CGCCCGCGCT GCGTACCAGC
CCCAGCCTGG ACGGCGCGAA GTGA
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| Protein sequence | MIARFVPSMR TRLPFLLLSR AAALALALAA SPLVHAEKAD RNKPMNIEAD ALRHDELKQT
SVFTGRVVMT KGTIVLRGAQ LEVRQDADGF QYGVVTAEPG KRAFFRQKRD TAPGAPDEFV
EGEGEVIEYD GRADVVKLIR RAELRRYREA TLTDELAGAL IVYNNLTDVF TVDGQKTAPA
GATAGTPGGR VRAVLAPKEP ASGTSATPPV RTEPPALRTS PSLDGAK
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