| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0318 |
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| Symbol | |
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| ID | 7383902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 329478 |
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| End bp | 330788 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643653631 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002551802 |
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| Protein GI | 222109538 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.199682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCGCC TGAACAACGC AACAGCCCGT GCTATCCGCC CCTTCCAGCG TACCCCTGTC
CCCGCAGCCC TCGCGGTTGC GCTGGCAGCG GCCCTCGCGC TCGGCGCCTG CGGTCAGAAA
AGCGACGCCC CCGCCGCGGG CGCATCACCC CGCGCACCGG AGGTGGGCGT GGTCACCGTG
CAGCCGGGGG ACATCGGGCT GGTCACCGAA TTGCCCGGCC GGCTGGAAGC CTCGCGCGTT
GCCGAAGTGC GCGCTCGGGC CGCGGGCATT CTGCAAAAGC GCCTCTTCAG GGAAGGCAGC
GATGTGAAGG CCGGCCAGCA ACTGTTCCTG ATCGACAGCG CGCCCTACCA GGCCAGTGTG
GCCCAGGCCG AGGCCAGCGT GGCCCAGGCC GAGGCGAGCC TGGCGCAAAG CCGTGCGCTG
GCCGAGCGCT ATCGCCCGCT GGTGGCCGTC AACGCCATCA GCAAGCAGGA ATACGACAAT
GCGGTCGCCG CGCAGAAGAC CGCCGAAGCC AATGTTGCCG CCGCCAAGGC CGCGCTGACC
ACGTCGCGCA TCAACCTGGG CTATGCGACG GTCACCGCTC CGATTTCCGG CCGCATTGGC
CGCGCCCTCG TCACGGAAGG CGCGCTGGTG GGCCAGGGCA CACCCACCGA GCTGGCGGTG
ATCCAGCAGA TCGACCCCCT GTATATCAAC TTCACGCAGT CCGCCTCGGA GGCCATCAAG
CTGAAGGCCG CCATGGCCAG CGGCAAGTAC AAGCAGTCCA GTGCCAATGC GGCCAACGTG
CGCGTGGTGC TGGAAGACGG CAGCGTGTAT CCGCAGGCGG GCCGGCTGCT GTTCACCGAC
CTCACGGTGG ATGCCACCAG CGGCCAGGTG ACCCTGCGTG CCGAGGTTCC CAACAGCGAC
CGCTCGCTGC TGCCCGGCCT GTATGTGCGG GTGCGCCTGG AGCAGGCGCA GGTGGACAAC
GGCATCTTGC TGCCCCAGCA GGCCGTCACC CGATCGGGCA AGGCCGACAC AGTGCTGGTG
GTGGGCGCGG ACAACCATGT CACGCCGCGG GTGGTCAAGC TGGGGCCCGC CCAGGGCGCC
CATTGGGTGG TGCTTGAGGG CCTGAAGTCG GGTGAGCAGG TGATGGTGGA CGGATTCCAG
AAGCTGCCAC GCGGCAAGCC TGGCGACCCC ATCGTTGTCA AGCCCGTCGC CTGGCAAGCT
GCTGGCGCCG CCCAACAGCC CGCCGCGGCA CCCGCATCCG CGCCGGCAGC GCCCGCCACC
CCCGCTTCGG CGGCCTCCAG TCAGCCGGCC CCTGCGGCGG CAAAGCAATA A
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| Protein sequence | MPRLNNATAR AIRPFQRTPV PAALAVALAA ALALGACGQK SDAPAAGASP RAPEVGVVTV
QPGDIGLVTE LPGRLEASRV AEVRARAAGI LQKRLFREGS DVKAGQQLFL IDSAPYQASV
AQAEASVAQA EASLAQSRAL AERYRPLVAV NAISKQEYDN AVAAQKTAEA NVAAAKAALT
TSRINLGYAT VTAPISGRIG RALVTEGALV GQGTPTELAV IQQIDPLYIN FTQSASEAIK
LKAAMASGKY KQSSANAANV RVVLEDGSVY PQAGRLLFTD LTVDATSGQV TLRAEVPNSD
RSLLPGLYVR VRLEQAQVDN GILLPQQAVT RSGKADTVLV VGADNHVTPR VVKLGPAQGA
HWVVLEGLKS GEQVMVDGFQ KLPRGKPGDP IVVKPVAWQA AGAAQQPAAA PASAPAAPAT
PASAASSQPA PAAAKQ
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