| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0316 |
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| Symbol | |
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| ID | 7383900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 324843 |
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| End bp | 326288 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643653629 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002551800 |
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| Protein GI | 222109536 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.464824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCGC ACACCCTCAA CCGCGCGCGC CCTGCGCGCG CCCTCTCCCC CCTGCTAGCC
GCGGCGCTGG TGGCGGGCTG CAGCTTCATC CCGACCTACG AACGTCCTGC GGCCCCCGTG
CCGCAGGCCT ATCCGCTGGC GGGGGCCGAA TCCACGACCT CCGCGCGGGC CGCGGCGGAC
ATCGACTGGA AGGAATACTT CACCGACCCC CGCCTGCAGC GGCTGATCGG CATGGCCCTG
GGCAACAACC GCGACCTGCG CGTGGCCATG CTCAATGTCG AGCAGGCGCG CGCGCAATTC
CAGATCCAGC GCGCCAACCA GTTCCCCACG GTCAACGCCA TCGCCAGCGG CACGCGCCAA
CCCAGCGCGA CCACGGGCAG CTACGCCAAT CAGTTCCAGG TGGGTTTGGG CATCTCGGCC
TGGGAGATCG ACTTCTTCGG GCGCGTGGCG GCCCTCAAGG AGCAGGCCCT GGCCCAGTAC
CTGGCCACGG ACGAGGCGCG CAAGTCGGCG CAGATCAGCC TGGTGGCGGC CGTGGCCTCG
GGCTGGCTCA CACTGATGGC CGACGAGGAG CTGCTCGACA TCTCGCGTCG CACGCTGGAA
ACGCGCGATG AGTCGGTCAA GCTCACACGC CTGCGCCTGG AGAACGGCGT GAGCTCCGAG
CTCGACAACC GCCAGGCCGA GAGCCTGGCC CAGGCCGCAC GCGCCACCTA TGCGCAGCAG
CAGCGCCAGC GCATGCTCGA TGAAAACGCG CTGGTCCTGC TACTGGGCCA GCCGCTGCCC
GACGACATCC GTGCCAGCCT GCCCTCCTCG CGCCTGGCCG ACGCCACGCC CATGCAGGCG
CTGCCCGCGG GCCTGCCTTC CGACCTGCTG GTGCGCCGCC CGGACGTGCG CATGGCCGAG
CAGCAGTTGA TCGGCGCCAA CGCCAACATC GGCGCGGCGC GCGCGGCGTT TTTCCCGCGC
ATCTCGCTCA CCGCCCAGTT CGGCACCGTG AGCGATGAGC TGTCGGGGCT GTTCAAGAGC
GGCTCGTGGG CGTTCTCTCT GGCGCCGCAA CTGGCCCTGC CGATCTTCGA TGCCGGCCGC
AACCAGGCGG GGTTGGAGTC CGCGCGCGCG GGCCGCGAAA TCGCCGTGGC CCAGTACGAG
AAGTCCATCC AGACCGCGTT CCGCGAGGTG TCCGACGCCC TGGCCGGCCA GGCCACGCTG
CAGGAGCAGG TCGACGCCCA GCGTGCCCAG GCGCAGGCGG ATGCCAAACG CTTCGAGCTG
TCGGACCTGC GCTATCGCAA CGGCGTGGCC AGCTACCTGG ACCTGCTGGA TGCGCAGCGC
TCGCTGTTCG CCACCCAGCA GTCACTGGTG GTGACACGCC TGCAGCAACT GCAGAACCAG
GTGACGCTCT ACAAGGTGCT GGGCGGCGGC TGGACCGCTC CCGCCGAAGA GACCCCACGC
TCCTGA
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| Protein sequence | MQSHTLNRAR PARALSPLLA AALVAGCSFI PTYERPAAPV PQAYPLAGAE STTSARAAAD
IDWKEYFTDP RLQRLIGMAL GNNRDLRVAM LNVEQARAQF QIQRANQFPT VNAIASGTRQ
PSATTGSYAN QFQVGLGISA WEIDFFGRVA ALKEQALAQY LATDEARKSA QISLVAAVAS
GWLTLMADEE LLDISRRTLE TRDESVKLTR LRLENGVSSE LDNRQAESLA QAARATYAQQ
QRQRMLDENA LVLLLGQPLP DDIRASLPSS RLADATPMQA LPAGLPSDLL VRRPDVRMAE
QQLIGANANI GAARAAFFPR ISLTAQFGTV SDELSGLFKS GSWAFSLAPQ LALPIFDAGR
NQAGLESARA GREIAVAQYE KSIQTAFREV SDALAGQATL QEQVDAQRAQ AQADAKRFEL
SDLRYRNGVA SYLDLLDAQR SLFATQQSLV VTRLQQLQNQ VTLYKVLGGG WTAPAEETPR
S
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