| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0267 |
|---|
| Symbol | |
|---|
| ID | 7383851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 284449 |
|---|
| End bp | 285612 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643653580 |
|---|
| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
|---|
| Protein accession | YP_002551751 |
|---|
| Protein GI | 222109487 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000362711 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCTC TTTTGTCCTC CCTGCGAACC TTTGCCTGCG CCGCCCTGAT GGCCCCCGCC
ATCCTCTGGG CGCAGGTGCC CCAACCGCCG GAGATCGCCG CCCGCAATTA CATGCTGGTG
GACGTGACGG CCGGCCAGGT GCTGGCGACC AAGGACATCG ACGCGCCGGT TGAGCAGGCT
TCGCTGACCA AGCTCATGAC GGGCTATCTG GTCTTTGACG CACTGCGCGC CAAGAAGATC
ACGCTGGAGC AGCGCCTGCC GGTGAGCGAG CGCGCTTGGA AGATGCCGGG TTCGCGCATG
TTCATCGATC CCAAGATGCA GGTTCCGGTG GACGACCTGC TCAAGGGCAT GATCGTGCAG
TCGGGTAACG ACGCCACCGT GGCCCTGGCC GAAGGTGTGG GCGGTACGGT GGAAAACTTC
GTGCGCCTGA TGAACGAGCA GGCCAAGGCG CTGGGCATGA CGAACACCGC CTACAAGAAC
CCCGAGGGGT TGACGGAGCC CGGCCACACC ACCACCGCGC GCGACCTGGC CACGCTGGCC
ACCCGGCTGA TGCAGGACTT CCCCGAGTAC ATGCACTACT ACTCGACCAA GCAGTACCGC
TACGAGGGCA CACCCGCCTC CAACAGCAAC AACCGCAACA TGCTGCTGTT CCGCGATCCA
TCGGTGGACG GCCTGAAGAC CGGCCACACC GCCGCCGCGG GCTATTGCCT GGTCGCCACG
TCCAAGCGCG AGTTTCCCAA TGTGGGGCAG CGCCGCCTGC TGTCTATCGT GCTGGGGGCC
GCGAGCGAGA ACGCCCGCGC CAACGAGAGC CAGAAGCTGC TGAACTGGGG CTACACGGCG
TTCGATTCGG TGAAGCTGTT CGACGCTGGC CAGGCTGCCG CCACGCCCGC CGTGTGGAAG
GGCACGCAGA GCACCCTCAA GATCGGCCGC CCTGAAGCCA TCGTGATCAC CGTGCCTTCG
GGCAGCGCGG GCAAGGTCAC GACCGAGATC GTGCGCAAGG ACCCGCTGGT CGCGCCCTTC
ACCAAGGGAC AGGCCATCGG CACGCTGAAG GTGAAGTTGG GTGAGCAGCA GGTGGCCGAG
GTGCCCCTGG TGGCGCTGGA GGATGTGGCA CAGGCCGGCA TCTTCGGCCG TGCCTGGGAC
GCCATTCGCC TCTGGATCAA GTAA
|
|---|
| Protein sequence | MKSLLSSLRT FACAALMAPA ILWAQVPQPP EIAARNYMLV DVTAGQVLAT KDIDAPVEQA
SLTKLMTGYL VFDALRAKKI TLEQRLPVSE RAWKMPGSRM FIDPKMQVPV DDLLKGMIVQ
SGNDATVALA EGVGGTVENF VRLMNEQAKA LGMTNTAYKN PEGLTEPGHT TTARDLATLA
TRLMQDFPEY MHYYSTKQYR YEGTPASNSN NRNMLLFRDP SVDGLKTGHT AAAGYCLVAT
SKREFPNVGQ RRLLSIVLGA ASENARANES QKLLNWGYTA FDSVKLFDAG QAAATPAVWK
GTQSTLKIGR PEAIVITVPS GSAGKVTTEI VRKDPLVAPF TKGQAIGTLK VKLGEQQVAE
VPLVALEDVA QAGIFGRAWD AIRLWIK
|
|---|
| |