| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0258 |
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| Symbol | |
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| ID | 7383842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 276096 |
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| End bp | 277649 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643653571 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002551742 |
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| Protein GI | 222109478 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.389882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACC ACCTCTCACC CTCCAGCGCC CCGGCGCTTA TTCCTGCGAC CGCGCCCCGC
GGCAGTGCGC TGCTGTATGG CGCCACGCTG GCCGTCGCGC TGCTGGCCCT GCCTCTGCTG
TCGGGCTGCG CCGACATGGC GGGTATCGAC TCCCACGCCC GGATGCGCGA CCCTGCCTCC
CTGGGCCTGG CCGCTGCGCC CTCATCCAGC GCAGATTCTG CTGTGCAGCC GCAGACTGCG
GTCTCCGCCG ACTGGTGGCG CAGCTTTGGC GATGCGCAGC TGGATGCGCT CATCACCCAG
GCCCTGCAAG GCAACCCCGG GCTGCAGCAG GCCGCCGCCC GCATCGCGCG CGCCGAGGCC
TTTGCCGACA CCGCCCGCGC GGCCCAGAGC CCGCAGGTCA ACGGCAGCCT GGACGCCACG
CGCCAGCGCT ACAGCGCCAA CGGACCCTAC CCCCCCGGCC AGGCCGGCGC CGTTCGTAGC
GTGGAAACCG CCCGCCTGTC GGGCAGCTGG GAGCTGGACT TCTTCGGCAA ACACCGTGCC
GCCCTCGCCG CCGCACTGGG CGAGGCCCAG GCCGCGCGCG CCGACGCCGA GGCCGCGCGC
CTGCTGCTCG CGAGCCGCGT GGCGCAGGGC TACTTTCAGC TGGCACGCTT GCAGGCCCAG
CGCGCCGTGG CCGAGCGCAC GCTGCAGCAG CGCACCGAAA TGCTGCAACT GGTGCAGCGG
CGCGTGCAGG CCGGGCTGGA CACCCAGCTG GAGCTGCGCC AAAGCGAAGG CGCCCTGCCC
GAAGCGCGCC AGCAGATCGA GGCGTTGCGC GAGCAGGAAG CCCTGGCACG CAACGCGCTG
GGCGCGCTGA TTGCAGACCC CCAGACGGCC CAGACGCTGA CCCCACAAGC GCTGGCAGCT
ATCCATTTTT CAGAAACCCC CGCCGCCGTG CCCGCCGACC TGCTGGGCCG CCGCCCCGAC
GTGGCGGCCG CGCGCTGGCG CGTGGAAGCC GCCACCCAGG ACATGGGCGT GGCGCGGGCG
CAGTTCTATC CCAACGTGAG CCTGACCGCC TTCGTGGGCC TGGCCAGCGT GGGGCTGGAC
CGTTTCATCG AGGCCGGCAG CCGTGAATGG GGCGTGGGCC CTGCGCTGCG CCTGCCGATC
TTCGATGCCG GCCGCCTGCG CGCCAACCTG CGCGGCAAGG CGGCCGACCG GGACGCCGCC
GTCGAAAGCT ACAACGCCGC CCTGCTGGAA GCGGTGCGCG ACGCGGCCGA CCAGCTGGCC
AGCAGCAGCT CGATCGCACG GCAGATCGCG GAGCAGCACC AGGCCGGCGA ATCCGCGCAG
GCCGCCTATG GCATTGCGCG GCGCCGCTAT GAGGCAGGCC TGGGCACCTA CCTGCAAGTG
CTGTCGGCCG AAAGCCAGGT GCTGGCCCAG CGCCGCCTGG CCGTGGACCT GGCCGCGCGG
CGGCTGGACA ACCAGGTGGG CGTGATGCGC GCCCTGGGCG GAGGCTATGC GGCCACGCCG
CCGCCCACGG CGCAAGCCCC GCAAGCGGCC CCCACGGTGG CGGCCGCCCG CTGA
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| Protein sequence | MKNHLSPSSA PALIPATAPR GSALLYGATL AVALLALPLL SGCADMAGID SHARMRDPAS
LGLAAAPSSS ADSAVQPQTA VSADWWRSFG DAQLDALITQ ALQGNPGLQQ AAARIARAEA
FADTARAAQS PQVNGSLDAT RQRYSANGPY PPGQAGAVRS VETARLSGSW ELDFFGKHRA
ALAAALGEAQ AARADAEAAR LLLASRVAQG YFQLARLQAQ RAVAERTLQQ RTEMLQLVQR
RVQAGLDTQL ELRQSEGALP EARQQIEALR EQEALARNAL GALIADPQTA QTLTPQALAA
IHFSETPAAV PADLLGRRPD VAAARWRVEA ATQDMGVARA QFYPNVSLTA FVGLASVGLD
RFIEAGSREW GVGPALRLPI FDAGRLRANL RGKAADRDAA VESYNAALLE AVRDAADQLA
SSSSIARQIA EQHQAGESAQ AAYGIARRRY EAGLGTYLQV LSAESQVLAQ RRLAVDLAAR
RLDNQVGVMR ALGGGYAATP PPTAQAPQAA PTVAAAR
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