Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0257 |
Symbol | |
ID | 7383841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 274849 |
End bp | 276057 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643653570 |
Product | secretion protein HlyD family protein |
Protein accession | YP_002551741 |
Protein GI | 222109477 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCAA CTCCCTCCAC CCCTTCCACC GCGTCGAAGG CTTCCCGCCG CAAGGCGCTG TTCACCCTGG CTGGCGTCGT CGTGCTCGCC GGCTGCGCCT GGGGCCTGTA CGACTGGCTG GTCGCCAGCC ACTACGAGCA CACCGACAAC GCCTACGTGC AGGGCAACGT CATCCAGATC ACGCCGCAGA CCGGCGGCAC GGTGATGTCC ATCCTGGCCG ACGACACCGA CTTCGTGCGC GCTGGCGCTG CGCTGGTGCA GTTGGACCCG GCTGACGCGC GCGTGGCGCT GCAGCAGGCC GAGGCCAACC TGGCGCAGGC CGTGCGGCAG ACACGCACGC TGTACGCCAA CAACAGCGCC CTGGCCGCGC AGGTGCGCCT GCGCGAGGCC GAGGCCGCAC GCGCCCAGGC CGAGATCGCG CGCGCCGAGG ACGACCTGCG CCGCCGCCAG GCCCTGACCG GCGAGGGCGC CGTCTCGCAG GAGGAACTGC GCCACGCGCA GAGCCAGCTG CAGACCGCGC GCACGCAGTT GGCCGCTGCG CAGGCGGGCG TGGCCGCCGC GCGCGAGCAG CTCGTCAGCA ACCAGTCGCT CACCCAGGGC GTCGCCGTGG CGCAGCACCC CAGCGTGCAG GCCGCAGCCG CCAAGGTGCG CGAGGCCTAC CTGGCCGATC GCCGCACCGC CCTGCCAGCG CCCGTGGACG GCTACGTGGC GCGGCGCACG GTGCAACTGG GCCAGCGCGT GGCCGCGGGC ACGCCGCTGA TGACCATCGT GCCGCTGCGC GAGGTCTGGG TGGACGCCAA TTTCAAGGAG AACCAGCTGC GCAACCTGCG CCTGGGCCAG CGCGCCACGC TCGTCGCCGA CCTGTACGGC AAGAAAGTGG AATACACCGG CACCGTGGCC GGGCTGGGCG TGGGCACGGG CGCTGCCTTC GCGCTGCTGC CGGCGCAGAA CGCCACCGGC AACTGGATCA AGGTGGTGCA GCGGGTGCCC GTGCGCATCG CGCTGGATGC CGGGCAGCTG GCCGAGCACC CGCTGCGCGT GGGCCTGTCG ATGAACGTGA GCGTGGACAC GCAGGACCGC AGCGGCCCGG CGCTGGCCGA TGCGCCGCGC AAGGAAGCGG TGGCCAGCAC GGCCGTGTAC GACGCGCTGG ACAAGGGCGC CGATGCCGAC GTGGCGCGCA TCATCCGCGC CAACCTGGGC ACGCTCTGA
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Protein sequence | MTATPSTPST ASKASRRKAL FTLAGVVVLA GCAWGLYDWL VASHYEHTDN AYVQGNVIQI TPQTGGTVMS ILADDTDFVR AGAALVQLDP ADARVALQQA EANLAQAVRQ TRTLYANNSA LAAQVRLREA EAARAQAEIA RAEDDLRRRQ ALTGEGAVSQ EELRHAQSQL QTARTQLAAA QAGVAAAREQ LVSNQSLTQG VAVAQHPSVQ AAAAKVREAY LADRRTALPA PVDGYVARRT VQLGQRVAAG TPLMTIVPLR EVWVDANFKE NQLRNLRLGQ RATLVADLYG KKVEYTGTVA GLGVGTGAAF ALLPAQNATG NWIKVVQRVP VRIALDAGQL AEHPLRVGLS MNVSVDTQDR SGPALADAPR KEAVASTAVY DALDKGADAD VARIIRANLG TL
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