Gene Dtpsy_0257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_0257 
Symbol 
ID7383841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp274849 
End bp276057 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content73% 
IMG OID643653570 
Productsecretion protein HlyD family protein 
Protein accessionYP_002551741 
Protein GI222109477 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR00998] efflux pump membrane protein (multidrug resistance protein A) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCAA CTCCCTCCAC CCCTTCCACC GCGTCGAAGG CTTCCCGCCG CAAGGCGCTG 
TTCACCCTGG CTGGCGTCGT CGTGCTCGCC GGCTGCGCCT GGGGCCTGTA CGACTGGCTG
GTCGCCAGCC ACTACGAGCA CACCGACAAC GCCTACGTGC AGGGCAACGT CATCCAGATC
ACGCCGCAGA CCGGCGGCAC GGTGATGTCC ATCCTGGCCG ACGACACCGA CTTCGTGCGC
GCTGGCGCTG CGCTGGTGCA GTTGGACCCG GCTGACGCGC GCGTGGCGCT GCAGCAGGCC
GAGGCCAACC TGGCGCAGGC CGTGCGGCAG ACACGCACGC TGTACGCCAA CAACAGCGCC
CTGGCCGCGC AGGTGCGCCT GCGCGAGGCC GAGGCCGCAC GCGCCCAGGC CGAGATCGCG
CGCGCCGAGG ACGACCTGCG CCGCCGCCAG GCCCTGACCG GCGAGGGCGC CGTCTCGCAG
GAGGAACTGC GCCACGCGCA GAGCCAGCTG CAGACCGCGC GCACGCAGTT GGCCGCTGCG
CAGGCGGGCG TGGCCGCCGC GCGCGAGCAG CTCGTCAGCA ACCAGTCGCT CACCCAGGGC
GTCGCCGTGG CGCAGCACCC CAGCGTGCAG GCCGCAGCCG CCAAGGTGCG CGAGGCCTAC
CTGGCCGATC GCCGCACCGC CCTGCCAGCG CCCGTGGACG GCTACGTGGC GCGGCGCACG
GTGCAACTGG GCCAGCGCGT GGCCGCGGGC ACGCCGCTGA TGACCATCGT GCCGCTGCGC
GAGGTCTGGG TGGACGCCAA TTTCAAGGAG AACCAGCTGC GCAACCTGCG CCTGGGCCAG
CGCGCCACGC TCGTCGCCGA CCTGTACGGC AAGAAAGTGG AATACACCGG CACCGTGGCC
GGGCTGGGCG TGGGCACGGG CGCTGCCTTC GCGCTGCTGC CGGCGCAGAA CGCCACCGGC
AACTGGATCA AGGTGGTGCA GCGGGTGCCC GTGCGCATCG CGCTGGATGC CGGGCAGCTG
GCCGAGCACC CGCTGCGCGT GGGCCTGTCG ATGAACGTGA GCGTGGACAC GCAGGACCGC
AGCGGCCCGG CGCTGGCCGA TGCGCCGCGC AAGGAAGCGG TGGCCAGCAC GGCCGTGTAC
GACGCGCTGG ACAAGGGCGC CGATGCCGAC GTGGCGCGCA TCATCCGCGC CAACCTGGGC
ACGCTCTGA
 
Protein sequence
MTATPSTPST ASKASRRKAL FTLAGVVVLA GCAWGLYDWL VASHYEHTDN AYVQGNVIQI 
TPQTGGTVMS ILADDTDFVR AGAALVQLDP ADARVALQQA EANLAQAVRQ TRTLYANNSA
LAAQVRLREA EAARAQAEIA RAEDDLRRRQ ALTGEGAVSQ EELRHAQSQL QTARTQLAAA
QAGVAAAREQ LVSNQSLTQG VAVAQHPSVQ AAAAKVREAY LADRRTALPA PVDGYVARRT
VQLGQRVAAG TPLMTIVPLR EVWVDANFKE NQLRNLRLGQ RATLVADLYG KKVEYTGTVA
GLGVGTGAAF ALLPAQNATG NWIKVVQRVP VRIALDAGQL AEHPLRVGLS MNVSVDTQDR
SGPALADAPR KEAVASTAVY DALDKGADAD VARIIRANLG TL