Gene Dtpsy_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_0247 
Symbol 
ID7383831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp267438 
End bp268112 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content72% 
IMG OID643653560 
Productprotein of unknown function DUF330 
Protein accessionYP_002551731 
Protein GI222109467 
COG category[R] General function prediction only 
COG ID[COG3218] ABC-type uncharacterized transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.661362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATCA AAATGATAGC TGTTGGCGCT CACCAGATAA GCGTTAAAGC CATTTTTGGC 
TTCACATTTA TGGCGCTGAT GGCGGGCTGC TCCATCCTCC CCGAGCCGCC GGTGCGCGCC
GATGTGTACG ACTTCGGCCC CGGTCCCTTG CAGGCGCCGG GCCCCGCGGC CAGCGCGCCG
CTGCCGCCGA TCGCGCTGGC CGAGGTGACC GCCACGGGCC TGCCCGAGGG CAGCACCGCG
CTGCTGTACC GGCTGGCCTA TACCAACGCC CAGCAACTGC GCCCCTACAC CCAGGCGCGC
TGGAGCCTGC CACCCGCCGT GCTGCTGCAC CAGGCGGTGC GCGAGCGCCT GGGCCAGCGC
CGCGCGGTGC TCTCAGGCGA CGACGGCATG GCCGTGTTGC TGGAGCGCGG CCGCATGCCC
AGCGTGCTGC GCCTGGAACT GGAGGAGTTC AGCCATGTGT TCGGCGCGCC CCAGGCGAGC
GCCGGCCTGG TGCGTGTGCG CGCCGTGCTG GCCGACGCGA GCACCGCGGG TGAGACGCTG
GTCACGCAGC GGGTGTTCGT GGCGCGGCGC GATGCCGCCA CGCCCGATGC CGCCGGCGGC
GCCAAGGCCC TGGCCGATGC GGCGGCCCAG GTGGCCGAGG AGCTGGCCGC ATGGGTGGAG
CAGTCCGGCC GCTGA
 
Protein sequence
MTIKMIAVGA HQISVKAIFG FTFMALMAGC SILPEPPVRA DVYDFGPGPL QAPGPAASAP 
LPPIALAEVT ATGLPEGSTA LLYRLAYTNA QQLRPYTQAR WSLPPAVLLH QAVRERLGQR
RAVLSGDDGM AVLLERGRMP SVLRLELEEF SHVFGAPQAS AGLVRVRAVL ADASTAGETL
VTQRVFVARR DAATPDAAGG AKALADAAAQ VAEELAAWVE QSGR