| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0243 |
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| Symbol | |
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| ID | 7383827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 262447 |
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| End bp | 264141 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643653556 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_002551727 |
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| Protein GI | 222109463 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACA CCACTTTCGA CTACATCATC ATCGGCGGCG GCACCGCCGG CGCCCTGCTG
GCCAACCGGC TCAGCGCAGA CCCCAAGAAC CGTGTGCTGC TCGTGGAGGC CGGCCGCAGG
GACGACTACC ACTGGATCCA CATTCCCGTG GGCTACCTGT ATTGCATCGG CAACCCGCGC
ACCGACTGGC TCTATCACAC CGAGGCCGAC ACCGGCCTGA ACGGCCGCAG CCTGCGCTAC
CCGCGCGGCA AGGTACTGGG CGGCTGCAGC AGCATCAACG GCATGATCTA CATGCGCGGC
CAGGCGCGCG ACTACGACCA GTGGGCGCAG ATCACGGGCG ACGACGCCTG GCGCTGGGAC
AGTGTGCTGC CGGCCTTTCG CCGCCACGAG GACCACTGGC GCCTGGACCA GCCCGAGGGC
GTGAACGAGA ACTTCAAGCG CCTGCACGGC AGCAAGTCCA CGGGCAGCTC GGGCGAGTGG
CGCGTGGAAA AGCAACGCCT GCGCTGGGAC ATCCTCGACG CCTTCGCCCA GGCCGCGCAG
CAGGCCGGCA TTCCCGCCAC CGACGACTTC AACCGCGGCA CCAACGAGGG CGTGGGCTAT
TTCGAGGTCA ACCAGAAGAA CGGCTGGCGC TGGAACACGG CCAAGGCCTT CCTGCGCCCC
ACCTGCTACG GGCGGCCCAA TTTCGAGATG TGGACCTCGG CCCAGGTGAC GCGCCTGATA
CTGGACCGTC AGCCGGACGG CAGCCTGCGC TGCACCGGCG TGCAGGTGTG GACCGGCGAG
GAAATGGTCA CGGCCCACGC GCAGCAGGAG GTGATCCTGA GCGCCGGCGC GGTGAACTCG
CCACAGATTC TGCAGCTGTC GGGCATCGGC CCCGGCGCGT TGCTGCAGCG GCACGGTATC
GACATACAGG CCGACCTGCC CGGCGTGGGC GCCAACCTGC AGGACCACCT GCAGATCCGC
GCCGTGTACA AGGTGCAGGG CGTGCCCACA CTGAACATGC TGGCGGGCAA CCTGCTGGGC
AAGGCCAGGA TCGGACTGGA ATACGCCTTC AAGCGCAGCG GTCCGATGAG CATGGCACCG
TCGCAACTGG GCGCCTTCAC ACGCAGCCAG CCGGACCTGC CGCACCCCAA CCTTGAGTAC
CACGTGCAGC CCCTGTCGCT GGAGGCCTTC GGCGAGCCGC TGCACCGTTT CCCGGCCTTC
ACGGCCAGCG TGTGCAACCT GAACCCCACC AGCCGCGGAA CCATCCAGAT CAAGAGCCCG
GACTTCCGCA CCGCGCCCGC CATCGCTCCC AACTACCTGT CCACGCCCGA GGACCGCCAG
GTGGCCGCCG ACAGCCTGCG CGTCACGCGC CGCATCGTGG CCCAGCCCGC ACTGGCTCCC
TACCAGCCCG AGGAATACAA GCCCGGCCCG CAGTACCAGA GCGACGAAGA CCTCGCCCGG
CTGGCGGGCG ATATCGCCAC CACCATCTTC CACCCCGTGG GCACTACGCG CATGGGCCGG
CTGGACGATC CGCAGGCCGT GCTGGATGCG CGCCTGCGCG TGCGCGACGG CCGCGGCGGC
GTGGTGGCCG GCCTGCGCGT GGTGGACGCG GGCGCCATGC CCACCATCAC CAGCGGCAAT
ACCAATGCAC CCACGCTGAT GATGGCCGAG ATGGCCGCCC AATGGATTCG CAGCGAGGCG
CGTGCCCCAG TTTGA
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| Protein sequence | MSDTTFDYII IGGGTAGALL ANRLSADPKN RVLLVEAGRR DDYHWIHIPV GYLYCIGNPR
TDWLYHTEAD TGLNGRSLRY PRGKVLGGCS SINGMIYMRG QARDYDQWAQ ITGDDAWRWD
SVLPAFRRHE DHWRLDQPEG VNENFKRLHG SKSTGSSGEW RVEKQRLRWD ILDAFAQAAQ
QAGIPATDDF NRGTNEGVGY FEVNQKNGWR WNTAKAFLRP TCYGRPNFEM WTSAQVTRLI
LDRQPDGSLR CTGVQVWTGE EMVTAHAQQE VILSAGAVNS PQILQLSGIG PGALLQRHGI
DIQADLPGVG ANLQDHLQIR AVYKVQGVPT LNMLAGNLLG KARIGLEYAF KRSGPMSMAP
SQLGAFTRSQ PDLPHPNLEY HVQPLSLEAF GEPLHRFPAF TASVCNLNPT SRGTIQIKSP
DFRTAPAIAP NYLSTPEDRQ VAADSLRVTR RIVAQPALAP YQPEEYKPGP QYQSDEDLAR
LAGDIATTIF HPVGTTRMGR LDDPQAVLDA RLRVRDGRGG VVAGLRVVDA GAMPTITSGN
TNAPTLMMAE MAAQWIRSEA RAPV
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