| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0240 |
|---|
| Symbol | |
|---|
| ID | 7383824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 259504 |
|---|
| End bp | 260265 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643653553 |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_002551724 |
|---|
| Protein GI | 222109460 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.551221 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATGT TCAAGACCCT GGCCACTGCT GTGGCGCTGT GCGCCGCCGT TGTCGTGCAG
GCGCGTCCCC TGGAAGAAAT CCAGAAGAGC GGCACCATCA TCCTCGGCTC CGAGGGGCAG
TACGCGCCGT TCAACTTCTT CAAGGGCAAG CAGCTCACGG GCTACGAGAT CGAAGTGGCC
GAGGCCGTGG TCAAGAAGAT GGGCCTGAAG TACGAGTGGA AGACCGTCGG CTTCGACGCG
CTGCTGACCG GCCTGGCCCA GGACCGGTGG GACCTGGTGA TCGCCTCGCA CGCCATCACC
GACGAGCGCT CCAAGGCCGT GACCTTCACG CTGCCGCACT ACTGCTCGGG CGGCATCATC
GTGTCGATGA AGCCCGAGGT GGCCAAGGCC GCCGACCTGA ATGGCAAGGT GGTGGCCGTG
CAGACCGGCA CCACCTATCT GGACGCCGTG AAGAAGGTGC CCGGCGTGAA GGACGTGAAG
AACTTCCCCA CCGACGAAGC CGCGCGCAAC GCCCTGGCGT CCAAGCGCGT GGACGCCTGG
GTGACCGACC GCTTCGTGGC CAAGGAAATG CTGGCCAAGG CGCCCAAGGC GGGCTTCCGC
ACGGGCGACA TGCTGTTCGT GGAGCAGGTG GCCTCCGCCG TCTCCAAGGG CAACCAGGGC
CTGGCCGACG CCTGGAACAA GGCGCTGAAG GAAGCGATCG CCGACGGCAC TGTGGGCAAG
ATCTCCCAGA AGTACTTCCA AGAAGACGTC ACCTGCAAGT AA
|
|---|
| Protein sequence | MKMFKTLATA VALCAAVVVQ ARPLEEIQKS GTIILGSEGQ YAPFNFFKGK QLTGYEIEVA
EAVVKKMGLK YEWKTVGFDA LLTGLAQDRW DLVIASHAIT DERSKAVTFT LPHYCSGGII
VSMKPEVAKA ADLNGKVVAV QTGTTYLDAV KKVPGVKDVK NFPTDEAARN ALASKRVDAW
VTDRFVAKEM LAKAPKAGFR TGDMLFVEQV ASAVSKGNQG LADAWNKALK EAIADGTVGK
ISQKYFQEDV TCK
|
|---|
| |