Gene Dtpsy_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_0239 
Symbol 
ID7383823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp258682 
End bp259464 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content68% 
IMG OID643653552 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_002551723 
Protein GI222109459 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCTCG CTCTCTGGCC CGCACACTGG AGCCGCACCC AGCGCAGCAA TGCAACGCTG 
GTGGCGGCTT TGGTGTTGAT GGCGCTGGTC CTCGCCCTGC TCGGCCAGTT CCTCTCCTTC
TTTCCTGAGC CCATCGGCTC CAACGCGGAG CTCTTCTCCG AAGGCGCGCT CACCACGCTG
TACCTGACGC TGGTCAGCGG CACCGTGGGC CTGCTGCTGG GCACGGCCGC GGCGCTGGCG
CGCACCTCGC GCCTGGCCTG GCTGCGCTGG GTGGCCAGCT TCTACATCTG GGCCATCCGC
GGCACGCCGC TGCTGGTGCA GATCCTGTTC GTGTACTTCG CGCTGCCCGT GCTGGTGCCG
GGCCTGAACC TGCCCGACTT CGCCGCCGCC GTGGTGGCGC TGGGCCTGAA CGTGGGCGCC
TACAACGCCG AGGCGATCCG CGCCGGCCTG CTGGCCGTGC CGCGCGGTCA GACGGAGGCG
GCGCGTGCAT TGGGCCTGTC GCGCACGCAC GTGTTCTTTG ACGTCGTGTT CCCCCAGGCC
TTCAAGATCG CGCTGCCGCC GCTGGTGAGC AACTTCGTAG CGCTGCTCAA GGACTCGTCG
CTCGCCTACG CCATCGGCGT GGTGGAGCTG ACCAACGTGG GCAACCGCAT CCAGTCCGCC
ACCTTCCAGC CCGTGGCCAC GCTGACCACG GTGGCCATCA CCTACCTGAT CCTGACCACG
CTGGTGACGC AGGTCACGCA TGCCATCGAG TACCGCTTTG ACGTCGAAGG GCGTGTGAAA
TGA
 
Protein sequence
MLLALWPAHW SRTQRSNATL VAALVLMALV LALLGQFLSF FPEPIGSNAE LFSEGALTTL 
YLTLVSGTVG LLLGTAAALA RTSRLAWLRW VASFYIWAIR GTPLLVQILF VYFALPVLVP
GLNLPDFAAA VVALGLNVGA YNAEAIRAGL LAVPRGQTEA ARALGLSRTH VFFDVVFPQA
FKIALPPLVS NFVALLKDSS LAYAIGVVEL TNVGNRIQSA TFQPVATLTT VAITYLILTT
LVTQVTHAIE YRFDVEGRVK