Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0239 |
Symbol | |
ID | 7383823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 258682 |
End bp | 259464 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643653552 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_002551723 |
Protein GI | 222109459 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTCTCG CTCTCTGGCC CGCACACTGG AGCCGCACCC AGCGCAGCAA TGCAACGCTG GTGGCGGCTT TGGTGTTGAT GGCGCTGGTC CTCGCCCTGC TCGGCCAGTT CCTCTCCTTC TTTCCTGAGC CCATCGGCTC CAACGCGGAG CTCTTCTCCG AAGGCGCGCT CACCACGCTG TACCTGACGC TGGTCAGCGG CACCGTGGGC CTGCTGCTGG GCACGGCCGC GGCGCTGGCG CGCACCTCGC GCCTGGCCTG GCTGCGCTGG GTGGCCAGCT TCTACATCTG GGCCATCCGC GGCACGCCGC TGCTGGTGCA GATCCTGTTC GTGTACTTCG CGCTGCCCGT GCTGGTGCCG GGCCTGAACC TGCCCGACTT CGCCGCCGCC GTGGTGGCGC TGGGCCTGAA CGTGGGCGCC TACAACGCCG AGGCGATCCG CGCCGGCCTG CTGGCCGTGC CGCGCGGTCA GACGGAGGCG GCGCGTGCAT TGGGCCTGTC GCGCACGCAC GTGTTCTTTG ACGTCGTGTT CCCCCAGGCC TTCAAGATCG CGCTGCCGCC GCTGGTGAGC AACTTCGTAG CGCTGCTCAA GGACTCGTCG CTCGCCTACG CCATCGGCGT GGTGGAGCTG ACCAACGTGG GCAACCGCAT CCAGTCCGCC ACCTTCCAGC CCGTGGCCAC GCTGACCACG GTGGCCATCA CCTACCTGAT CCTGACCACG CTGGTGACGC AGGTCACGCA TGCCATCGAG TACCGCTTTG ACGTCGAAGG GCGTGTGAAA TGA
|
Protein sequence | MLLALWPAHW SRTQRSNATL VAALVLMALV LALLGQFLSF FPEPIGSNAE LFSEGALTTL YLTLVSGTVG LLLGTAAALA RTSRLAWLRW VASFYIWAIR GTPLLVQILF VYFALPVLVP GLNLPDFAAA VVALGLNVGA YNAEAIRAGL LAVPRGQTEA ARALGLSRTH VFFDVVFPQA FKIALPPLVS NFVALLKDSS LAYAIGVVEL TNVGNRIQSA TFQPVATLTT VAITYLILTT LVTQVTHAIE YRFDVEGRVK
|
| |