| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0220 |
|---|
| Symbol | |
|---|
| ID | 7383484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 240494 |
|---|
| End bp | 241132 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643653534 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_002551705 |
|---|
| Protein GI | 222109441 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCACT ACCGCACCCT CCCCGTCACC GCGTTCCAGC AAAACAGCTC CATCGTCTGG
TGCGATGAAA CGATGGACGC CGCGGTCATC GACCCCGGAG GCGACCTGGA TGCCCTGGTG
GCAGAAGTGC AGCGCCTGGG CCTGCAACTG AAGGCCATCT GGCTCACGCA CGCGCACATC
GACCACGCCG GTGGTACGGG CGAGCTGGCC GAGCGGCTGT CCCTGCCCAT CATCGGACCG
CATACGGGCG ACCAGTACTG GATCGACGCG TTGCCGCAGC AAAGCGCCAT GTTCGGCTTT
CCGCCCGCGC GGCAGTTCGC GCCCACGCGC TGGCTGCACG ACGGCGACAC GGTCACCATC
GGCCATGAGA CCTTGAACGT GCGCCATTGC CCGGGCCACA CGCCGGGCCA CGTGGTGTTC
CACGCGCCGC AGATCGGCCG CGCCTTCGTG GGCGACGTGC TGTTCGCCGG CAGCATCGGC
CGCACGGACT TCCCGCAGGG CAACCACCAG CAGCTCATAG CCAGCATCAC CCAGCGCCTG
TGGCCCATGG GCGACCAGAC GGTGTTCATC CCTGGGCACG GGCCGGAGAG CACCTTCGGG
CGCGAGCGCC GCAGCAATCC TTATGTGGGC AATACGTGA
|
|---|
| Protein sequence | MLHYRTLPVT AFQQNSSIVW CDETMDAAVI DPGGDLDALV AEVQRLGLQL KAIWLTHAHI
DHAGGTGELA ERLSLPIIGP HTGDQYWIDA LPQQSAMFGF PPARQFAPTR WLHDGDTVTI
GHETLNVRHC PGHTPGHVVF HAPQIGRAFV GDVLFAGSIG RTDFPQGNHQ QLIASITQRL
WPMGDQTVFI PGHGPESTFG RERRSNPYVG NT
|
|---|
| |