| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0183 |
|---|
| Symbol | |
|---|
| ID | 7383447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 206122 |
|---|
| End bp | 207072 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643653497 |
|---|
| Product | SMP-30/Gluconolaconase/LRE domain protein |
|---|
| Protein accession | YP_002551668 |
|---|
| Protein GI | 222109404 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3386] Gluconolactonase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0284148 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACTG CCTGGACGCC CCTGGCCGCC GCGCCCGCGC AACTCGGCGA ATCTCCCTTC
TGGCACCCCC TGGAGTCCCG TCTGTACTGG GTGGACATCG CCGGCCGCGC GCTGTGGCGC
AGCGGCGCGC ACGGAAGCGA TGCGCAATGC TGGCCCCTGC CGGCCGAGCC CGGCTGCATC
GCGCCGGCGC GCCAAGGGGG CACACCCGCA GGTCTCGTGG TGGCGCTGCG CGACCGCATC
TGCCACGCGC CGCGCTGGGG CGGGCCGCTC CTCACGATGG CGCACTTGCC CATCGACCCG
GCGACCGAGC GTGCCAACGA CGGCAAGTGC GACGCGCTCG GGCGCCTGTG GGTGGGCACG
GTGCATGAGC CCGCCCAGGG CCCGCGCCAG CCCGTCGCTG CGCTGTACTG CATCGACCTG
CGTGGCCGGG ACCAGGGCGG CCCCGATGCT CCCACGGTGC GCCGCATGCT GGACGGCGTG
GCCACCGCCA ACGGCCTGGC CTGGTCGCCG GACGGGCGCA CGCTGTATTG GAGCGACACG
CCCTCGCACA CCATCCGCGC GTGGGACTGC AACGCCCAGT TGGAGCCCAT CGGGGCGCCG
CGTGTGTTGC ACCGCTTTGC GACGCGCGAT GAGGCAGTCC CCTATGGCGG CCGCCCGGAC
GGTGCCGCCG TGGATGCCGA AGGCGCCTAC TGGTGCGCGC TGTACGAGGG CGCGCGCGTG
CTGCGCTTGT CGCCGCGCGG CGAGGTGCTG GCCGAGCTGC CCACGCCGCT GTCCTGCCCC
ACCATGCCCT GCGTCGGTGG GCCGGACGGG CACACGCTGT TCGTCACCTC TGCACGCAAG
GGCCGCAGTG CCGATGAGCT GGCGCGCTGG CCCCAGTCGG GGCAGGTGCT GTCCACCCGC
GTGGCCGTGG CGGGGTTGCC CGTGGCCTGG TGCGAGATCG GCCAGCGCTG A
|
|---|
| Protein sequence | MNTAWTPLAA APAQLGESPF WHPLESRLYW VDIAGRALWR SGAHGSDAQC WPLPAEPGCI
APARQGGTPA GLVVALRDRI CHAPRWGGPL LTMAHLPIDP ATERANDGKC DALGRLWVGT
VHEPAQGPRQ PVAALYCIDL RGRDQGGPDA PTVRRMLDGV ATANGLAWSP DGRTLYWSDT
PSHTIRAWDC NAQLEPIGAP RVLHRFATRD EAVPYGGRPD GAAVDAEGAY WCALYEGARV
LRLSPRGEVL AELPTPLSCP TMPCVGGPDG HTLFVTSARK GRSADELARW PQSGQVLSTR
VAVAGLPVAW CEIGQR
|
|---|
| |