Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0174 |
Symbol | |
ID | 7383438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 196352 |
End bp | 197104 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643653488 |
Product | ABC transporter related |
Protein accession | YP_002551659 |
Protein GI | 222109395 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.159658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCTGC TGCAGGTCCA GGAGCTGCGC AAGTCCTTCG GCGGAGTGCA GGCCGTGCAG GGCGTGTCGT TCGCACTGCA GGCCGGCGAG TTGCTGGCGC TGATCGGCCC CAACGGCGCG GGCAAGAGCA CCACCTTCAA CCTGGTGGGC GGGCAGCTCT TGCCCGATGC GGGGCGCGTG CTGCTGCAGG GGCAGGACAT CACCGGCCTG GCGCCACGCG CCGTCTGGCG GCGTGGCGTG GGCCGCACCT TCCAGATCGC GCAGACCTTC GCCAGCTTTA CCGTGCTGCA GAACGTGCAG ATGGCGCTGC TGTCGCACGA CCGGCAGGCC TGGCGCTGGT GGCGCCGCGC CGACGCGCAC CGCCCGCACG ATGCCCTGGC GCTGCTGGAG CAGGTGGGCA TGGCTGCCCA GGCGCAGCGC CCGTGCAGCG CGCTGGCCTA CGGCGACGTC AAGCGCGTGG AGCTGGCCAT GGCGCTGGCG CACGCCCCGG CGCTGCTGCT CATGGACGAG CCCACCGCCG GCATGGCACC GGCCGAGCGC CTGGCGCTCA TGCAGCTGGT GCAGCGCATC GCGCGCGAAC GGCACATGGG CGTGCTGTTC ACCGAGCACA GCATGGACGT GGTCTTCGGC CTGGCCGACC GCGTGGCCGT GCTGGTGCGC GGCCAGCTGC TGGCCGAGGG CACGCCGCAG CAGATCCAGG ACGACGCGCG GGTGCAGGCC GCCTACCTGG GCACGGAGCT GGAGTCGGCA TGA
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Protein sequence | MSLLQVQELR KSFGGVQAVQ GVSFALQAGE LLALIGPNGA GKSTTFNLVG GQLLPDAGRV LLQGQDITGL APRAVWRRGV GRTFQIAQTF ASFTVLQNVQ MALLSHDRQA WRWWRRADAH RPHDALALLE QVGMAAQAQR PCSALAYGDV KRVELAMALA HAPALLLMDE PTAGMAPAER LALMQLVQRI ARERHMGVLF TEHSMDVVFG LADRVAVLVR GQLLAEGTPQ QIQDDARVQA AYLGTELESA
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