Gene Dtpsy_0173 details

Gene Information

• Locus tag: Dtpsy_0173
• ID: 7383437
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 194448
• End bp: 196355
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643653487
• Product: inner-membrane translocator
• Protein accession: YP_002551658
• Protein GI: 222109394
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0559] Branched-chain amino acid ABC-type transport system, permease components; [COG4177] ABC-type branched-chain amino acid transport system, permease component

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0422307
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGTTT CGGGGCTGCT GGCCCAACTG CTCAATGGCC TGGCGGGCGC TTCCACGTTG 
TTCCTCGTGG CGGCGGGGCT GTCGCTGATC TTTGGGGTGA TGCGCATCGT CAACTTCGCG 
CACGGCTCGT TTTACATGCT GGGCCTGTAC CTGGCCTATG CCCTGGTGGA GCGTCTGGGC 
GATGCCCTCG GCTTCTGGCC TGCGCTGCTG CTGGCTCCGC TGGCCGTGGG CCTGCTGGGC 
GCGGCGGTGG AGGTGCTGCT GCTGCGCCGC ATCTACCGCG CACCCGAACT GCTGCAGCTG 
CTGGCCACCT TCGCCTTGGT GCTGGTGATC AAGGACGCGG CGCTGTGGCT CTGGGGGCCG 
GAGGAGCTGT TCGGCCCGCG TGCGCCGGGC CTGGAGGGCG CGGTGGACCT GCTGGGCCGG 
CGCTTCCCAG CCTACGACCT GTTCCTCATT GCCGTGGGGC CGCTGGTGCT GGTGCTGCTC 
ACGCTGCTGC TCACGCGCAC GCGCTGGGGC ACGCTGGTGC GCGCCGCCAC GCAGGACCGT 
GAGATGGTCG GTGCGCTGGG TGTGAACCAG GCCTGGCTGT TCACCAGCGT GTTCGCGCTG 
GGGGCCCTGC TGGCAGGCCT GGGCGGCGCG CTGCAGCTGC CGCGCGAGCC CGCCAGCCTG 
GAGCTGGACA TGCTCACCAT CGGCGCCGCC TTCGTGGTAG TGGTGGTGGG CGGCATGGGC 
TCGCTGCCCG GCGCCTTCGT GGCGGCGTTG GTGATTGCCG AGCTCAAGGC CGTGTGCATC 
TGGCTGGGCG TGGTCGAGGT CGCGGGGGTG GAGGTGGCCT TTCCCCGGCT CACGCTGGTG 
GTGGAGTTCC TGGTGATGGC GGCCGTGCTC ATCTGGCGGC CCTGGGGCTT CATGGGCCGC 
CCGCAGGCCG TGGCGCGTGG CGTGGGCACG CCCGAGGCGC CGCTGCGCCA GGCGGGGCAG 
GGCGCCACGG CCGCCTGGTG CGCGTTGGTG CTGGCCCTGG CGCTGCTGCC GCTGGCGGTG 
GAGCCGGGCA GCTACGCCAC CGTGTTGCTG ACCGACATCG CGATTGCCGC GCTGTTCGCC 
GCCAGCCTGC ATTGCATCCT GGGGCCGGGC GGGCTGCATT CGTTCGGCCA TGCGGCGTAC 
TTCGGCCTGG GCGCCTACGG CGCGGCGCTG CTGGTGCGCT GGCTGGACTG GCCCATGGGC 
ATGGCGCTGC TGCTGGGGCC GCTGGTGGCG GCGGCCGGCG CGCTGGTGTA CGGCTGGTTC 
TGCGTGCGCC TGTCGGGCGT GTCGCTCACC ATGCTGACGC TGGCGTTCGC ACAGATCACC 
TGGGCCATCG CCTACCAGTG GGACGGGTTC ACCGGCGGCA GCAACGGCAT CACCGGCGTG 
TGGCCGCCGC AGTGGGCCGC GCAGGGCGCG GGCTTCTATT GGCTGGTGCT GGCGCTGGCC 
GTGGCGGGCA TCTACCTGCT GCGGCGCATG CTGTTTGCAC CGCTGGGCTG GGCGCTGCGC 
GCGGCGCGCG ACTCGGCGCT GCGGGCCGAC GCCATTGGCA TCGACGTGCG CGGCGTGCAG 
TGGGCCGCCT TTGTGGTGGC AGGGCTGCTG GCCGGTCTGG CGGGGGCGCT GTACGTGTTT 
TCCAAAGGCA GCGTGGCGCC CGATGCGCTG GGCGTGTCGC GCTCGGTGGA CGGGCTGGTG 
ATGGTGCTGC TGGGCGGCAT GCAGCAGCTG GCCGGGCCGG TGGTGGGCGC GGGCGTGTTC 
ACCTGGCTGC ACGACACCGT GGCGCGCAGT ACCGACTACT GGCGCGCGCT GCTGGGCGGC 
ATCATGCTGC TGCTGGTGCT GCTGTTTCCT CAAGGAATTT CGGGGTTTGC GCAGGTGTGG 
AAAGCGCTGG CAGCTATCAA AAACAAAGCA CAGGAGGGCG CGCCGTGA 

 

Protein sequence

MDVSGLLAQL LNGLAGASTL FLVAAGLSLI FGVMRIVNFA HGSFYMLGLY LAYALVERLG 
DALGFWPALL LAPLAVGLLG AAVEVLLLRR IYRAPELLQL LATFALVLVI KDAALWLWGP 
EELFGPRAPG LEGAVDLLGR RFPAYDLFLI AVGPLVLVLL TLLLTRTRWG TLVRAATQDR 
EMVGALGVNQ AWLFTSVFAL GALLAGLGGA LQLPREPASL ELDMLTIGAA FVVVVVGGMG 
SLPGAFVAAL VIAELKAVCI WLGVVEVAGV EVAFPRLTLV VEFLVMAAVL IWRPWGFMGR 
PQAVARGVGT PEAPLRQAGQ GATAAWCALV LALALLPLAV EPGSYATVLL TDIAIAALFA 
ASLHCILGPG GLHSFGHAAY FGLGAYGAAL LVRWLDWPMG MALLLGPLVA AAGALVYGWF 
CVRLSGVSLT MLTLAFAQIT WAIAYQWDGF TGGSNGITGV WPPQWAAQGA GFYWLVLALA 
VAGIYLLRRM LFAPLGWALR AARDSALRAD AIGIDVRGVQ WAAFVVAGLL AGLAGALYVF 
SKGSVAPDAL GVSRSVDGLV MVLLGGMQQL AGPVVGAGVF TWLHDTVARS TDYWRALLGG 
IMLLLVLLFP QGISGFAQVW KALAAIKNKA QEGAP