Gene Dtpsy_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_0172 
Symbol 
ID7383436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp193128 
End bp194315 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content67% 
IMG OID643653486 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002551657 
Protein GI222109393 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0221424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAGC CCTTCACCCC CCTGCTCGCC CTGCTGTTTG CGGGTGGCGC CTATGCGCAG 
GGGGCCTACA CGATCGGGGA GATCAACAGC TACAAGGCCC AGCCCGCCTT CCTGGAGCCC
TACAAGAAGG GCATGGAACT GGCGGTCGAG CAGATCAATG CGGCCGGCGG CATCCAGGGC
AAGCAGCTGC GGCTGGTCAC GCGCGACGAC AACGCCACCC CCGGCGACGC GGTGCGCGCG
GCCGAGGAAC TGATCGCGCG CGAGAAGGTG GATGTGCTCA TGGGCAGCTT TCTGTCGCAC
GTGGGCCTGG CGCTGACCGA CTTCGCGCAG CAGAAGAAGC GCTTCTTCCT GGCGGCCGAA
CCGCTCACCG ACAAGATCGT GTGGGAGCAC GGCAACCGCT ACACCTTCCG CCTGCGCCCC
TCCACCTACA TGCAGGTGGC CATGCTGGTG CCCGAAGCCG TGGCGCTGAA AAAAAAGCGC
TGGGCCATCG TCTACCCCAA CTACGAGTAC GGCCAGTCGG CCGTGGCCAC CTTCAAGCAG
CTGCTCAAGG CCGCGCAGCC GGACGTGGAG TTCGTTGCCG AGCAGGCCAC GCCGCTGGGC
AAGGTGGACG CCGGCAGCGT GGCGCAGGCG CTGGAAGACG CCAAGCCCGA TGCGATCTTC
AACGTGCTGT TCGCCGCCGA CCTCGCCAAA TTCGTGCGCG AGGGCAACAC CCGCGGGCTG
TTCGCGGGCC GCAGCGTGGT GAGCCTGCTG TCGGGCGAGC CGGAATACCT GGACACGCTC
AAGAGCGAGA CGCCCGAGGG CTGGATCGTC ACCGGCTACC CCTGGTATGC CATCCAGACC
CCCGAGCACA AGGCCTTTCT GGACGCCTAC ATGAAGCGTT TCAAGGACTA CCCGCGCGCG
GGCTCGGTGG TGGGCTACAA CGCCGTCCAG TCGGTTGCGG CGGGGCTGGC CAAGGCCGGA
TCGGCCGACA CCGAGAAACT CATCACCGCC TTCCGCGGCC TGCAGGTGGC CACGCCGTTC
GGTCCCATCA CCTACCGCAC GCAGGACCAC CAGTCCACCA TGGGTGCCTA CGTGGGCAAG
ACCGCGCTGC GCATGGGCAA GGGTGTGATG GTGGACTTCA CCTACCGCGA CGGCGCCAAG
TACCAGCCCA GCGACGCCGA GGTGAAGCGG CTGCGCAAGG ACGAGTGA
 
Protein sequence
MHKPFTPLLA LLFAGGAYAQ GAYTIGEINS YKAQPAFLEP YKKGMELAVE QINAAGGIQG 
KQLRLVTRDD NATPGDAVRA AEELIAREKV DVLMGSFLSH VGLALTDFAQ QKKRFFLAAE
PLTDKIVWEH GNRYTFRLRP STYMQVAMLV PEAVALKKKR WAIVYPNYEY GQSAVATFKQ
LLKAAQPDVE FVAEQATPLG KVDAGSVAQA LEDAKPDAIF NVLFAADLAK FVREGNTRGL
FAGRSVVSLL SGEPEYLDTL KSETPEGWIV TGYPWYAIQT PEHKAFLDAY MKRFKDYPRA
GSVVGYNAVQ SVAAGLAKAG SADTEKLITA FRGLQVATPF GPITYRTQDH QSTMGAYVGK
TALRMGKGVM VDFTYRDGAK YQPSDAEVKR LRKDE