Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0172 |
Symbol | |
ID | 7383436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 193128 |
End bp | 194315 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643653486 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_002551657 |
Protein GI | 222109393 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0221424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACAAGC CCTTCACCCC CCTGCTCGCC CTGCTGTTTG CGGGTGGCGC CTATGCGCAG GGGGCCTACA CGATCGGGGA GATCAACAGC TACAAGGCCC AGCCCGCCTT CCTGGAGCCC TACAAGAAGG GCATGGAACT GGCGGTCGAG CAGATCAATG CGGCCGGCGG CATCCAGGGC AAGCAGCTGC GGCTGGTCAC GCGCGACGAC AACGCCACCC CCGGCGACGC GGTGCGCGCG GCCGAGGAAC TGATCGCGCG CGAGAAGGTG GATGTGCTCA TGGGCAGCTT TCTGTCGCAC GTGGGCCTGG CGCTGACCGA CTTCGCGCAG CAGAAGAAGC GCTTCTTCCT GGCGGCCGAA CCGCTCACCG ACAAGATCGT GTGGGAGCAC GGCAACCGCT ACACCTTCCG CCTGCGCCCC TCCACCTACA TGCAGGTGGC CATGCTGGTG CCCGAAGCCG TGGCGCTGAA AAAAAAGCGC TGGGCCATCG TCTACCCCAA CTACGAGTAC GGCCAGTCGG CCGTGGCCAC CTTCAAGCAG CTGCTCAAGG CCGCGCAGCC GGACGTGGAG TTCGTTGCCG AGCAGGCCAC GCCGCTGGGC AAGGTGGACG CCGGCAGCGT GGCGCAGGCG CTGGAAGACG CCAAGCCCGA TGCGATCTTC AACGTGCTGT TCGCCGCCGA CCTCGCCAAA TTCGTGCGCG AGGGCAACAC CCGCGGGCTG TTCGCGGGCC GCAGCGTGGT GAGCCTGCTG TCGGGCGAGC CGGAATACCT GGACACGCTC AAGAGCGAGA CGCCCGAGGG CTGGATCGTC ACCGGCTACC CCTGGTATGC CATCCAGACC CCCGAGCACA AGGCCTTTCT GGACGCCTAC ATGAAGCGTT TCAAGGACTA CCCGCGCGCG GGCTCGGTGG TGGGCTACAA CGCCGTCCAG TCGGTTGCGG CGGGGCTGGC CAAGGCCGGA TCGGCCGACA CCGAGAAACT CATCACCGCC TTCCGCGGCC TGCAGGTGGC CACGCCGTTC GGTCCCATCA CCTACCGCAC GCAGGACCAC CAGTCCACCA TGGGTGCCTA CGTGGGCAAG ACCGCGCTGC GCATGGGCAA GGGTGTGATG GTGGACTTCA CCTACCGCGA CGGCGCCAAG TACCAGCCCA GCGACGCCGA GGTGAAGCGG CTGCGCAAGG ACGAGTGA
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Protein sequence | MHKPFTPLLA LLFAGGAYAQ GAYTIGEINS YKAQPAFLEP YKKGMELAVE QINAAGGIQG KQLRLVTRDD NATPGDAVRA AEELIAREKV DVLMGSFLSH VGLALTDFAQ QKKRFFLAAE PLTDKIVWEH GNRYTFRLRP STYMQVAMLV PEAVALKKKR WAIVYPNYEY GQSAVATFKQ LLKAAQPDVE FVAEQATPLG KVDAGSVAQA LEDAKPDAIF NVLFAADLAK FVREGNTRGL FAGRSVVSLL SGEPEYLDTL KSETPEGWIV TGYPWYAIQT PEHKAFLDAY MKRFKDYPRA GSVVGYNAVQ SVAAGLAKAG SADTEKLITA FRGLQVATPF GPITYRTQDH QSTMGAYVGK TALRMGKGVM VDFTYRDGAK YQPSDAEVKR LRKDE
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