| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0158 |
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| Symbol | |
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| ID | 7383422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 176722 |
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| End bp | 177924 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643653472 |
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| Product | muconate and chloromuconate cycloisomerase |
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| Protein accession | YP_002551643 |
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| Protein GI | 222109379 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR02534] muconate and chloromuconate cycloisomerases |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACTT CTCCTTCCGC TTCCGTGCTG CGCATCGAAC GCATCCAGGC ACGCATCCTG
GACATCCCCA CGATCCGCCC GCACAAGCTC TCGTTCGGCG CCATCCAGCG CCAGAGCCCC
GTGATCGTGC AGCTGTGGCT GAGCGATGGC GCCAGCGGCT TCGGCGAGGC CGCGACCATC
GGCGGCCCCT CGTGGAACGA GGAATCGCCC GAGAGCATCC GGCATGCCAT CGACAGCTAC
CTCGCGCCTG CCGTGATCGG CCAGGACGCG GGCCGCTTCG AGCAGTTGCT GCAGCGCATG
GACCTGGCCT GCAAGGGCAA CCGCTTTGCC AAGAGCGCCG TGGAGCAGGC CGCCATCGAC
GCCGTGGCGC GCAGCCTGGG CCTGCCCGTG TGGCAACTGC TGGGCGGCAA GCAGCGCGAG
AGCCTGCCCC TGGCCTGGAC GCTGGCCAGC GGCGACTCCG CCAAGGACAT CGAGGAGGCC
GAGAAGATGC TGGCCGCGCG CCGCCACCGC ATCTTCAAGC TGAAGATCGG CGCACGCGCG
CCACAGGAGG ACGTGGCGCA CGTGGCACGC ATCGCCCGCG CGCTGGACGG CCGCGCCAGC
ATGACGGTGG ACGTGAACCA GGCCTGGGAC GGCGCCACCG CGCGCCGCTA CCTGCCCGAG
ATGATCGACG CCGGTGTGGG TCTGATCGAG CAGCCCGTGG CCCAGTGGAA CGAGGAGGCG
CTGCGCCAGC TCACCGCCAC GCTGCCCCAC ACCGCGCTGG TGATGGCCGA CGAGACCGTC
TGCACGCCGC AGGACGCGAT GCGCCTGGCG CGCCATAACG CCTGCCATGT GTTCTCGCTC
AAGATCGCCA AGCACGGCGG CCTGCTGCGC ACGCGCGCCG TGGCCGACGT GGCGCGCGCC
GCCGACATCG GCTGGTACGG CGGCACGATG CTGGAGACCT CCGTCGGCAG CGCCGCCTCG
GCCCATGTGT TTGCCACGCT GGGCGGCACG CACCACAACT GCGAGCTGTT CGGCCCGCAG
CTGCTGGTAG ACGACATCGT GGAGCAGCAG ATGGTCCTTT CCGACTTCGC GCTGCAGTTG
CCCGACGGGC CGGGCTTCGG CCTCACCGTG GTGCCCGAGC GGCTCGACCG CTTCGACCGT
GCACGCCAGG GCCTCACGCC CGTGCACGTG GACCTGGGCC GCGCCAGCGC GCAGCCCGCC
TGA
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| Protein sequence | MTTSPSASVL RIERIQARIL DIPTIRPHKL SFGAIQRQSP VIVQLWLSDG ASGFGEAATI
GGPSWNEESP ESIRHAIDSY LAPAVIGQDA GRFEQLLQRM DLACKGNRFA KSAVEQAAID
AVARSLGLPV WQLLGGKQRE SLPLAWTLAS GDSAKDIEEA EKMLAARRHR IFKLKIGARA
PQEDVAHVAR IARALDGRAS MTVDVNQAWD GATARRYLPE MIDAGVGLIE QPVAQWNEEA
LRQLTATLPH TALVMADETV CTPQDAMRLA RHNACHVFSL KIAKHGGLLR TRAVADVARA
ADIGWYGGTM LETSVGSAAS AHVFATLGGT HHNCELFGPQ LLVDDIVEQQ MVLSDFALQL
PDGPGFGLTV VPERLDRFDR ARQGLTPVHV DLGRASAQPA
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