| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0153 |
|---|
| Symbol | |
|---|
| ID | 7384385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 171687 |
|---|
| End bp | 172991 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643653467 |
|---|
| Product | Glu/Leu/Phe/Val dehydrogenase |
|---|
| Protein accession | YP_002551638 |
|---|
| Protein GI | 222109374 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAACA CCCCCAACCC ACCCCTTCCC ACCCACGCGC TGCCGTCCTA TCTGGACCCC
AACCACCTCG GCCCCTGGGG GGTGTATCTG CAGCAAATCG ACCGCGTCAC CCCTTACCTG
GGCAGCCTGG CGCGCTGGGT GGAGACGCTG AAGCGCCCCA AGCGTGCGCT GATCGTGGAT
GTGCCCATTG AGCTGGACAA CGGCACCATC GCCCACTTCG AGGGCTACCG CGTGCAGCAC
AACGTCAGCC GAGGCCCGGG CAAGGGCGGT GTGCGCTTTC ACCAGGACGT GACCCTGTCC
GAAGTCATGG CCCTGTCGGC CTGGATGAGC ATCAAGAACG CGGCCGTGAA CGTGCCCTAC
GGTGGCGCCA AGGGCGGCAT CCGCGTCGAC CCCAAGACCC TGTCGAAGGC CGAGCTGGAG
CGCCTGACGC GCCGCTACAC CAGCGAAATC GGCATCATCA TCGGCCCCTC CAAGGACATT
CCCGCGCCGG ACGTGAACAC CAACGCCCAG GTCATGGCCT GGATGATGGA CACCTATTCC
ATGAACGTGG GCACCACCGC CACCGGCGTG GTCACGGGCA AGCCCGTGGA CCTGGGTGGC
TCGCTGGGCC GCGTGGAGGC CACAGGCCGC GGCGTGTTCA CCGTGGGCGT GGAGGCCGCG
CGCCTGACCG GCATGGCCAT CGAGGGTGCG CGCGTGGCCG TGCAGGGCTT TGGCAACGTG
GGTGGCACGG CCGGCAAGCT GTTTGCCGAG GCCGGCGCCA AGGTGGTGGC GGTGCAGGAC
CACACCGGCA GCATCCACAA CGACAAGGGT CTGGACGTGC CGGCGCTGCT GGCGCACGTG
CAGCAAACCG GCGGCGTGGG CGGATTCGCC GGTGCCGAGC CCATGGCCAA CGACGCCTTC
TGGGGCGTGG CCTGCGACAT CCTGATCCCC GCAGCGCTGG AGAGCCAGAT CACCAAGGAC
AACGCGGGAC GGATCCAGGC CAAGATGGTG ATCGAGGGCG CCAACGGCCC CACCACCCCC
GAGGCCGACG ACATCCTCAA CGACAAGGGC GTACTGGTGC TGCCCGACGT GATCTCCAAC
GCCGGCGGCG TGACGGTCAG CTACTTCGAG TGGGTGCAGG ACTTCTCCAG CTTCTTCTGG
ACCGAGGACG AGATCAACGC CCGCCTGGTG CGCATCATGA AAGAGGCCTT CGCGGGCGTG
TGGCAGGTGG CGCAGGAGAA CAAAGTCACG CTGCGCACGG CGACCTTCAT CGTGGCCTGC
AAGCGCATCC TGCATGCACG CGAGATGCGC GGCCTGTACC CCTGA
|
|---|
| Protein sequence | MSNTPNPPLP THALPSYLDP NHLGPWGVYL QQIDRVTPYL GSLARWVETL KRPKRALIVD
VPIELDNGTI AHFEGYRVQH NVSRGPGKGG VRFHQDVTLS EVMALSAWMS IKNAAVNVPY
GGAKGGIRVD PKTLSKAELE RLTRRYTSEI GIIIGPSKDI PAPDVNTNAQ VMAWMMDTYS
MNVGTTATGV VTGKPVDLGG SLGRVEATGR GVFTVGVEAA RLTGMAIEGA RVAVQGFGNV
GGTAGKLFAE AGAKVVAVQD HTGSIHNDKG LDVPALLAHV QQTGGVGGFA GAEPMANDAF
WGVACDILIP AALESQITKD NAGRIQAKMV IEGANGPTTP EADDILNDKG VLVLPDVISN
AGGVTVSYFE WVQDFSSFFW TEDEINARLV RIMKEAFAGV WQVAQENKVT LRTATFIVAC
KRILHAREMR GLYP
|
|---|
| |