Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0152 |
Symbol | |
ID | 7384384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 170357 |
End bp | 171337 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643653466 |
Product | porin Gram-negative type |
Protein accession | YP_002551637 |
Protein GI | 222109373 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATGT CCCAATGCCT GCCTCTCAGT TTTGCCACCC TCGCCGCCCT CGCCCTGCCG GCCACCGCGC AGTCGCAAGT GACCATCAGC GGCTATCTGG ACACCGGCGT CTTTCGTGAC TACGACAAGA CCCGCAAGCT GGGGACGATC CAGCGCAGCC ATCTGGCGGT GGCCGGCACG GAAGACCTGG GCGGTGGCCT CAAGGCCAAC TTCCGCCTGA GCACACGCTT CGAGCTGGAC ACGGGGCAAT CCGAAGGGGC GGGCAGCAAG CCCTTCTGGC ATGACGAATC CACCGTGGGC CTGCAAGGCG GCTGGGGCCA GTTGCGCCTG GGCCGCGCCC TCAGCGCGAT GTGGAGCCAG GAATGGAAGT TCGACGCCTT CTCCAACTTC AACCGCATTG CCTCCACCGC CTGGCACATG GCCCACTACT ACACGCCCAC CGACCGCGCC AGCAACAACG GGGCCGCGGA GTACGGGCGC ATGACCAACG GCATCTACTA CGACTCGCCC ACCTGGGACG GCTTCTCGTT CAATGCCAGC GCCTCGACCG AGCGCACCCA GACACCCGGC CGCGACGGGC GCGGCGGCTC GGTGGCACTG AACTACGACC AGGGCCCGGT GGCCGCCATG GTGGGCTACG AGCGCAACGG CAGCGGTGAC AAGGACCTGT TCCTGGGCGG TCTCTACCGC CTGGGCGCCG CCACGCTGAT GATGGCCTAC GACCACAGCC GCGCGGGGAG CAGCCCCGAT ACGTCGCGCA TGGTATCGGT GGGCGGCAGC TACGCCCTGG GTGTCACCAC GCTGCGCGCC AGCTATGGCC GCCAGCGGCT GAACGACGGG GTGACCCACC ACATGGCTTC ACTGGGGGCG GAGTACAACC TGTCCAAGCG CACCATGCTC TACGCGAGCC TGGGGCACCA GCGCTACGAA CACAACCCCT CGCGTACGGC GTTCGGCGTG GGCGTGGCCC ACGCCTTCTG A
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Protein sequence | MRMSQCLPLS FATLAALALP ATAQSQVTIS GYLDTGVFRD YDKTRKLGTI QRSHLAVAGT EDLGGGLKAN FRLSTRFELD TGQSEGAGSK PFWHDESTVG LQGGWGQLRL GRALSAMWSQ EWKFDAFSNF NRIASTAWHM AHYYTPTDRA SNNGAAEYGR MTNGIYYDSP TWDGFSFNAS ASTERTQTPG RDGRGGSVAL NYDQGPVAAM VGYERNGSGD KDLFLGGLYR LGAATLMMAY DHSRAGSSPD TSRMVSVGGS YALGVTTLRA SYGRQRLNDG VTHHMASLGA EYNLSKRTML YASLGHQRYE HNPSRTAFGV GVAHAF
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