Gene Dtpsy_0149 details

Gene Information

• Locus tag: Dtpsy_0149
• ID: 7384381
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 167521
• End bp: 167943
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643653463
• Product: thioesterase superfamily protein
• Protein accession: YP_002551634
• Protein GI: 222109370
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism
• TIGRFAM ID: [TIGR00369] uncharacterized domain 1

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGGGG CTCCGCCGCT GGTGGACCGC AGCGCCTTCT TGCGCCTGAT CGGCGCCGCG 
CAGGTGCCGG CGCCGCCGGG CAAGGTGCAG GTGCGCCTGC CGCACCTGCG CGAGGAACTG 
CTCAACCAGT TACCCGCTGC GCATGGCGGC GTGGTCATGG CGCTGCTGGA TTCCGTGATG 
TCGCGCGCCG CGGGCGAGCT GCCCGAGGCG CCCTCGCAGA CCGCGGTGAC GGTGGAGATG 
AGCAGCCGCT TTCACCGCCC GGGGCGCGGC GCGCTGCTGG CCGAAGGCTG GGTGGTGCAT 
GCCACGCGCA GCCTGTGCAG TTGCGCGGGC CAACTGCTGG ACGAGGACGG CCAGCTCGTG 
GCCACCGCAC ACGGCACCTT CAAGTACTGG CTGGCGCCGA CCACGCTTGA TTCAAAAAAG 
TGA 

 

Protein sequence

MSGAPPLVDR SAFLRLIGAA QVPAPPGKVQ VRLPHLREEL LNQLPAAHGG VVMALLDSVM 
SRAAGELPEA PSQTAVTVEM SSRFHRPGRG ALLAEGWVVH ATRSLCSCAG QLLDEDGQLV 
ATAHGTFKYW LAPTTLDSKK