| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0138 |
|---|
| Symbol | |
|---|
| ID | 7384370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 155310 |
|---|
| End bp | 156227 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643653452 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002551623 |
|---|
| Protein GI | 222109359 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGA AGATGGTGCA GGACAAGGTG GTGGTGGTGA CGGGGGCTGG CGGCGGCATC
GGGCGCGACA TGGCGCTGGC GCTGGCCGCC GCCGGGGCCA AGGTGGTGGT GAACGACATC
GGCACCTCCA CCACGGGCGA AGGCACCGAC GCCGGCCCCG CGCAGAAGGT GGTCGAGGAG
ATCAAGGCCG CCGGCGGCCA GGCCGTGGCC AACATGGACA GCGTGGCCGA GGCCGCCGCG
GCGGGCCGCA TCATCCAGTG CGCGCTGGAC CACTTCGGCC GCATCGACGG CGTGGTCAAC
AACGCGGGCA TCCTGCGCGA CCGGTTCTTC CACAAGATGA GCCTGGACGA GTGGGACGCC
GTGCTCAAGG TGCACCTGTA CGGCAGTTAC TACATGAGCC GCGCGGCCGC CAACCATTTC
AAGGAGCAGG AGAGCGGCGC CTTCGTGCAC ATGACCTCCA CCTCGGGCCT GATCGGCAAC
TTCGGCCAAG CCAACTACAG CGCGGCCAAG CTGGGGCTGG TGGCGCTGTC CAAGTCCATC
GCGCTGGACA TGCAGCAGTT CCACGTGCGC TCCAACTGCA TCGCGCCCTT TGCGTGGAGC
CGCATGATCG GCTCGATCCC CACCGACACG CCCGAGCAGC AGGCGCGCGT GGCCAAGATC
CAGCAGATGA CGCCCAACAA GATCGCTCCG CTGGCCGTGT ACCTGCTGTC GGACCAGGCC
AAGGACGTGA ACGCCCAGGT CTTCGCCGTG CGCAACAACG AGATCTTCCT GATGAGCCAG
CCGCGCCCCC TGCGCTCGGT GCACCGCAGC GAAGGCTGGA CGCCCGAGTT CATCGCTGAG
CACGGCATGC CCGCGCTCAA GGCCTCGTTC GTGCCCATGG AGCGCTCGGG CGACGTGTTC
TCCTGGGATC CTGTGTGA
|
|---|
| Protein sequence | MAQKMVQDKV VVVTGAGGGI GRDMALALAA AGAKVVVNDI GTSTTGEGTD AGPAQKVVEE
IKAAGGQAVA NMDSVAEAAA AGRIIQCALD HFGRIDGVVN NAGILRDRFF HKMSLDEWDA
VLKVHLYGSY YMSRAAANHF KEQESGAFVH MTSTSGLIGN FGQANYSAAK LGLVALSKSI
ALDMQQFHVR SNCIAPFAWS RMIGSIPTDT PEQQARVAKI QQMTPNKIAP LAVYLLSDQA
KDVNAQVFAV RNNEIFLMSQ PRPLRSVHRS EGWTPEFIAE HGMPALKASF VPMERSGDVF
SWDPV
|
|---|
| |