Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0130 |
Symbol | |
ID | 7384362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 146463 |
End bp | 147686 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643653444 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002551615 |
Protein GI | 222109351 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.879042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTCT TCCGTACACA ACCGCTGTGG GTCATGCTGC TCACGCTGCT GTCGGGCTTT GCGCTGAGCC AGGCTTACCG CACCACCACC GCCATCGTGG CCCAGGGCCT GCAGGCAGAT TTCGGCCTGC AGGCTTCCTC GTTGGGGGCG TTTGCCGGAC TGTTTGGTTT GTCGTTCGGC ATTGCGCAAC TGCTGATGGG CATCGCACTG GACCGCTACG GCCTGCGCCG TACGGTGCTG GTGGCTGCGC CCCTGGGCAT CGCTGGCGCG GCCCTGTCTG CGCTGGCGCC CAGCTATGGC TGGCTGATGG TCGGTCAGGT GCTGATCGGG GTGGGCTATT CACCCGCCTT CGTGGCCTGC ACGCTGTTCA TTGCGCGCTA TTTCGCGGCC GACCGGTTTG CCTTTTTCTC GGGCCTGAGC ATGGGCCTGG GCGGGCTGGG GTTGCTGTTC ACCGGCACAC CGCTGGCCTG GGTGGTGCAG CACTGGGGCT GGCGTGCCGG CTTTGGCCTG CTGGCTGGCC TGAGCCTGCT GTCGTGGCTG TTGATTTATG CGCTGGTGCA TGAACCGGTA CGTGCCGATA CCGCACACCG TCCAGCCAGC AGCTGGGGGG AGGCGCTGAC GGGCATGGGA CGGCTCTTTA CCGTGCCACA CACCTGGGGC ATCGTGATCC TCGGCATGTC GTGCTATGCG GCCTTTTTGT CGCTGCGCGG CCTGTGGCTG GGGCCTCTGC TGATCGACCG CTACGGTTTT TCGCTGGTGG ACAGTGGCAA CGTGGCGCTG GTGCTGTCGC TGATTGCGCT GTTCACCCCC GCCGCTTTCG GCCGCATGGA CCCGGGCCCC GCCCGGCGCC GCACCTGGGT GGGCCGCGCT TCGCTGTCGA TGGCCGGCCT GTTCGCCATC ATGGCCTGGG TCAACAACGC CCAGGCCACG GTGGCGCTGA TGATCGCGAT GGGGCTGCTG TCAGGCTACA GCATCTTGCA ATATGCCGAC GTGCGCTCGT CCTACCCCAA CGAACAGACG GGACGCGCCC TGTCGCTCTA CACCATGGCC ATGTTTCTGG GGGTGGCGCT GATGCAATCG CTGACCGGCG CCGTGGCCGC CTGGGCCACC AGCGCCGGGC TGGAGCCCTA CCGCGCGGTG TTGCTGTGCA TCGCCGCCTG GCTGGCGCTG GCGTCGCTGG CCTTCAGGCT GCTGCCAGCG TCCGCGCTGC TCCAGCAACG GTAA
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Protein sequence | MRLFRTQPLW VMLLTLLSGF ALSQAYRTTT AIVAQGLQAD FGLQASSLGA FAGLFGLSFG IAQLLMGIAL DRYGLRRTVL VAAPLGIAGA ALSALAPSYG WLMVGQVLIG VGYSPAFVAC TLFIARYFAA DRFAFFSGLS MGLGGLGLLF TGTPLAWVVQ HWGWRAGFGL LAGLSLLSWL LIYALVHEPV RADTAHRPAS SWGEALTGMG RLFTVPHTWG IVILGMSCYA AFLSLRGLWL GPLLIDRYGF SLVDSGNVAL VLSLIALFTP AAFGRMDPGP ARRRTWVGRA SLSMAGLFAI MAWVNNAQAT VALMIAMGLL SGYSILQYAD VRSSYPNEQT GRALSLYTMA MFLGVALMQS LTGAVAAWAT SAGLEPYRAV LLCIAAWLAL ASLAFRLLPA SALLQQR
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