Gene Dtpsy_0070 details

Gene Information

• Locus tag: Dtpsy_0070
• ID: 7382761
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: -
• Start bp: 78014
• End bp: 79921
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643653388
• Product: Radical SAM domain protein
• Protein accession: YP_002551559
• Protein GI: 222109295
• COG category: [C] Energy production and conversion
• COG ID: [COG1032] Fe-S oxidoreductase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGCAG CCCTGCCCCG CGTGCTGTCC GTCATCCCGC CGATGACGCA GCTCAACACG 
CCCTACCCCT CCACCGCCTA CCTCACGGGC TTTCTGCGCT CGCGCGGCGT GCCGGCGTGG 
CAGGAGGACT TGGCGATCGC GCTGGTGTTG CGGCTGCTCT CGCGCGACGG TCTCGCGCAG 
GTCGCCGAAA GGGCGCGGGC CCTGCCCGCA AACGCGCAGA GCCCGGCGGT GCAGTCCTTT 
CTTGCACAGC AGGAGCGGTA CCTGGCCACC ATCGGCCCAG CCATGGCCTT TTTGCAGGGC 
CGCGACAGCA CCCTCGCGCA CCGCATCGTG GGCCGCCACT ACCTGCCGGA AGGGCCGCGC 
TTCGCGGCGC TGGACGTGTA CGAGGACGAC GGCAGCGGCG ACCCGCTGGG CTGGGCCTTC 
GGCGCCCTGG GCCTGACCGA CAAGGCCAAG CATCTGGCCA CGCTGTACCT CAACGACCTG 
GCGGACGTGC TGCAGGGCGC CGTGGACGCG CGTTTCGAGT TTGTGCGATA CGCCGAACAG 
CTCGCCGGCA GCCAGCCCAC GTTCGACCCG CTGGCCGACG CGCTGGCGCA GGCGCCGACC 
TTCGTGGACG AGGTGCTGCA GCAGCTCACC CATGAGGCCG TCGCGCGCCA CCAGCCCGGC 
GTGGTGCTGC TCTCGGTGCC CTTCCCGGGC TCGGTGTACG GCGCGTTTCG CATTGCCCAG 
GCCATCAAGG CACGGCACCC GCACATCGTC ACCGTGCTCG GCGGCGGCTT CGTCAACACC 
GAGCTGCGCG AGCTGGCCGA CCCACGGGTG TTCGATTTCT TCGACTACGT GACGCTGGAC 
GCCGGCGAGC GCCCGCTGCT CGCGCTGCTG GAGCACCTGC AAGGCCAGCG CGGGCGCCAG 
CGGCTGGTGC GCACCTTTGT GCGCAATGAC GATGGTGCCG TGCAGTACGT CCACCTGGCG 
GAGCCCGACG TCGCCTTTGC CGAGATCGGC ACGCCCACCT GGGACGGCCT GCCGCTTCAG 
CGCTATCTGT CGCTGCTGGA CATGCTCAAC CCCATGCACC GGCTGTGGAG CGACGGGCGC 
TGGAACAAGC TCACCGTGGC GCACGGCTGC TACTGGAAGA AGTGCAGCTT CTGCGACGTG 
AATCTGGACT ACATCGGCCG CTACGAGGGC GCCAGCGCCC AGGTGCTGGC CGACCGCATC 
GCGGCCATCG TGGCCGAGAC CGGGCAGACC GGTTTTCACT TCGTCGATGA AGCCGCGCCG 
CCCAAGGCCC TCAAGGCGCT CGCGCAGGAG CTGATCGCAC GCGGCACCGG CATCTCCTGG 
TGGGGCAACG TGCGCTTTGA AAAGACCTTC ACGCCCGAGC TGGCCGAGCT GCTGGCCGAC 
GCGGGCTGCA TCGCCATCTC GGGCGGGCTG GAGGTCGCCT CCGATCGGCT GCTGGGCCTG 
ATGAAGAAGG GCGTCAGCGT GGACCAGGTG GCGCGCGTGA CCCGCGCATT CAGCGACGCG 
GGCATCCTGG TGCATGCCTA CCTGATGTAC GGCTTTCCCA CGCAAACCGT GCAGGACACG 
GTGGACGCGC TGGAATACGT GCGCCAGCTG TTCGAGAACG GCTGCATCCA GAGCGGCTTC 
TTCCACCGCT TTGCCTGCAC CGTGCATTCG CCCGTGGGAC AGAACCCCGA GGAATACGGC 
GTGACCCTGG CCCCGCTGCC GCCGGGCGGT TTTGCCAAGA ACGATGTGGC GTTCATCGAC 
CCCACGGGGG TGGACCACGA CGCGCTGGGC GCCGGGCTGA AGAAGGCCAT CTACAACTAC 
ATGCACGGCA TCGGGCTGGA GCAGGACGTG CGCATGTGGT TCCCCTTCCA CGTGCCCAAG 
ACCACGGTGC GGCCAGGCCG CATCGCGCGC GCCCTGGCGG CGCGATAG 

 

Protein sequence

MPAALPRVLS VIPPMTQLNT PYPSTAYLTG FLRSRGVPAW QEDLAIALVL RLLSRDGLAQ 
VAERARALPA NAQSPAVQSF LAQQERYLAT IGPAMAFLQG RDSTLAHRIV GRHYLPEGPR 
FAALDVYEDD GSGDPLGWAF GALGLTDKAK HLATLYLNDL ADVLQGAVDA RFEFVRYAEQ 
LAGSQPTFDP LADALAQAPT FVDEVLQQLT HEAVARHQPG VVLLSVPFPG SVYGAFRIAQ 
AIKARHPHIV TVLGGGFVNT ELRELADPRV FDFFDYVTLD AGERPLLALL EHLQGQRGRQ 
RLVRTFVRND DGAVQYVHLA EPDVAFAEIG TPTWDGLPLQ RYLSLLDMLN PMHRLWSDGR 
WNKLTVAHGC YWKKCSFCDV NLDYIGRYEG ASAQVLADRI AAIVAETGQT GFHFVDEAAP 
PKALKALAQE LIARGTGISW WGNVRFEKTF TPELAELLAD AGCIAISGGL EVASDRLLGL 
MKKGVSVDQV ARVTRAFSDA GILVHAYLMY GFPTQTVQDT VDALEYVRQL FENGCIQSGF 
FHRFACTVHS PVGQNPEEYG VTLAPLPPGG FAKNDVAFID PTGVDHDALG AGLKKAIYNY 
MHGIGLEQDV RMWFPFHVPK TTVRPGRIAR ALAAR