| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0056 |
|---|
| Symbol | |
|---|
| ID | 7382747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 59741 |
|---|
| End bp | 60484 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643653374 |
|---|
| Product | ChaC family protein |
|---|
| Protein accession | YP_002551545 |
|---|
| Protein GI | 222109281 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3703] Uncharacterized protein involved in cation transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.857973 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCCC ACGCCTTCAG GCACCTGCCC GAACTGCAAG GACGGCTCAC GCCGCCCCAG
GCCAGCGGGC TGCGCCTGAC CGACGAGGTG CTCGCCGCCT GGGATGCACA GGCGCGCCAG
CAGGGCCTGT CCGCCGACTG GCGGCTGCCC GATGACGTGG TCGAGCGCTC ACGCCAGGCC
GTGCTGGCGC AGAGCGAGGG GTGCGACCTC TGGGTGTTTG CCTACGGCTC GCTGATGTGG
AACCCCGCCA TCCACTTTGA CGAGGTGCGC CGCGCCCGGC TCGCGGACCA TGCGCGCCGC
TTCGCGCTGG CCACCACGAT CGGCCGCGGT ACACCCGACA GCCCGGGCCT GGTACTCACG
CTGCAGCGCG GCGTGGGTGA CTGCGAGGGG TTGGCATTCC GCATTCCCCA GGCGCTGCTG
GAGCGGGAGT CGCGCATGCT GTGGCGGCGC GAAATGATCC ACGGCAGCTA CTGCCCGGGC
TTTCAACCGC TGCACACGCC GCAGGGCGGT GTGCGCGCGC TGGTGCTGTC CGCCAACACC
GCGCACCCGC TGCACCGCGG CGGGCTGTCG CTGGACGACA CCGCGGCCAT CATCGCCAGC
GCGCAGGGCA GCGTGGGCAG CAACCGCGAC TACCTGGACC AGCTGGCGTG CCAACTCGAC
CTCTTGGGCA TCCGCGATGA CTACGTGCGC TGCCTGGCTG CCCGGGTGCG CGCGCACCGC
GCGGCGCCGA ACCGGGGTGG TTAA
|
|---|
| Protein sequence | MEPHAFRHLP ELQGRLTPPQ ASGLRLTDEV LAAWDAQARQ QGLSADWRLP DDVVERSRQA
VLAQSEGCDL WVFAYGSLMW NPAIHFDEVR RARLADHARR FALATTIGRG TPDSPGLVLT
LQRGVGDCEG LAFRIPQALL ERESRMLWRR EMIHGSYCPG FQPLHTPQGG VRALVLSANT
AHPLHRGGLS LDDTAAIIAS AQGSVGSNRD YLDQLACQLD LLGIRDDYVR CLAARVRAHR
AAPNRGG
|
|---|
| |