Gene Dtpsy_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_0030 
Symbol 
ID7382721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp34609 
End bp35862 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content71% 
IMG OID643653348 
Productnucleoside recognition domain protein 
Protein accessionYP_002551519 
Protein GI222109255 
COG category[R] General function prediction only 
COG ID[COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTCA ACTGGGTCTG GACGGGGTTT TTCATCGTGG CGTTCGCCAC CGCCGTGGTG 
CGCTGGTTGC TGGGCGAAGC GGGCATCTTC CAGGCCCTGC TGACGGCGCT GTTCGACGGC
GCACGCGCGG GCTTCGAGAT CTCGCTGGGC CTGGCCGGCA TCATGGCGCT GTGGCTGGGC
CTGATGCGCG TGGGCGAGCG CGCGGGCATG GTCGAGCTGC TGGCGCGCCT GGCCGGGCCG
CTGCTCACGC GGCTGTTTCC CGCCGTGCCC GCCGGCCACC CCGCCCAGGG CGCGATGACC
ATGAACATCA GCGCCAACCT GCTGGGGCTG GACAACGCGG CCACGCCGCT GGGCCTCAAG
GCCATGCAGG AACTGCAGAC GCTCAACCGC GAACCGGCGG GCGCGGCCAG CAACGCGCAG
ATCATGTTCG TGGTGATGAA TACGGCGGGG CTGACGCTGA TCCCCACGTC CGTCATCGCC
ATCCGCCAGA GCGTGGCGCT GAAGCAGGGC CTGGGCGCGG GCTTCAACGC CGCCGACATC
TTCCTGCCCA CGCTGCTGGT CACCTTCGCC TCGCTGCTGG CGGGTGTGCT GGCGGTGGCG
CTCTTTCAGC GCCTGCCGAT CTGGCGCGCG CGCCTGCTGC TGCCTTTGCT GGCCGTGGGC
GGCGTGCTGG CGGCGGCGGT GGCGGGCCTG GCGCAACTGC CCGCAGAGCA AGCCGCCCAG
ATTGCGGGAG CCACGGGCGC GGGCGTGATC CTGGGGGTGG TGGCGCTGTT CCTGCTGGCT
GGGGCCTGGC GCCGCGTGAA CGTGTACGAC GCCTTCATCG ACGGCGCCAA GGAGGGCTTT
GGCGTGGCGG TGCAGATCAT TCCGTACCTG GTGGCCATCC TGGCGGCCAT CGGCGTGTTC
CGCGCCGCGG GCTGCATGGA TGCGCTGCTG GCGGCCATCG GCGCGGGGGT GGCGGCGCTG
GGGTGGAACA CCGACTTCCT GCCGGCCCTG CCCGTGGGGC TGATGAAGGT GCTCTCGGGC
GCCGGCGCCC GGGGTTTGAT GATCGACGTG CTGCAGACGC ACGGTGTGAA TTCCTTCGTG
GGGCGCCTGG CCGCCATCGT GCAGGGCTCC ACCGAGACCA CCTTCTACGT GCTGGCCGTG
TACTTCGGCA GCGTGGGCGT GAAGCACACA CGCCACGCAC TGGCCTGCGC GCTGGTGGCC
GATGCCGTGG GGCTGCTGGC CGCGATCGGT GTGGGCTACA CGCTGCTGCG CTGA
 
Protein sequence
MALNWVWTGF FIVAFATAVV RWLLGEAGIF QALLTALFDG ARAGFEISLG LAGIMALWLG 
LMRVGERAGM VELLARLAGP LLTRLFPAVP AGHPAQGAMT MNISANLLGL DNAATPLGLK
AMQELQTLNR EPAGAASNAQ IMFVVMNTAG LTLIPTSVIA IRQSVALKQG LGAGFNAADI
FLPTLLVTFA SLLAGVLAVA LFQRLPIWRA RLLLPLLAVG GVLAAAVAGL AQLPAEQAAQ
IAGATGAGVI LGVVALFLLA GAWRRVNVYD AFIDGAKEGF GVAVQIIPYL VAILAAIGVF
RAAGCMDALL AAIGAGVAAL GWNTDFLPAL PVGLMKVLSG AGARGLMIDV LQTHGVNSFV
GRLAAIVQGS TETTFYVLAV YFGSVGVKHT RHALACALVA DAVGLLAAIG VGYTLLR